Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g00787 | ATGGGCAGATTTGGTTGGCTAGGGTTTGCACCAAAGTCTCTGTCCCAGGTTCGACGGTTTCATGACGTTCATCGGCGTTTGCCGTCTTCGGTGGTGACATCTGAGTTTTCTTATGATCATGGAGATCGGCGTTGTGGATATTCACTGTTGCGACAAACGTTCTTCTTCACGCGGACTTTATATGGTTGCAGTTTTGATATTACTGAGAAACCTGCCAAATTCTCAACCACTAGAGTATCATTGATAAAGCGGTATTTTCATGCTACAGGATTATGCAACTCAAGAGAACGGGACTTCTATGAAATCCTAGGTGTTCCTAAGGATGCTACTCGAGATGAAATAAAAAAGGCTTTTCATGTGCTTGCCAAGAAATACCATCCAGATGCAAATAAGAATAATCCTGCAGCAAAGAGGAAATTCCAAGAGATAAGGGATGCCTATGAGACCTTGCGTGATTCTGAAAAGCGAGCACAATATGATAGGGGGCGAACTAGAGGTGCTCCAGAAGGAGGATATGCTGCTAGAGATACAGAGGGATTTGGTGATGCTCAAGAGCATTTCTCTGATACATTCCAAAAAATTTTCTCTGAGATATTTGAACATGAGACAGAAGATTTTGCGACTGAGATACAGGTGGAGCTGGTACTCTCTTTTTCTGAAGCTGCTAAAGGCTGCCAAAAGCATCTGTCCTTTGATGCGCGTGTTCTTTGTGACTCCTGCAATGGACGTGGCCATCCAATTGATGCAAAGCCAAAAGTATGTCCAACATGTAAAGGCATTGGAAGAGTTACACTTCCTCCATTCACATCAACATGCAATACTTGTAAAGGAGTGGGCCGAATTATTAAGGAAAATTGTATAGCATGCAGAGGATCTGGGGTGGTTGAAGGTGTCAAGGAGGTTAAAGTTAAAATCCCAGCAGGTGTTGATTCTGGAGATACAATCCGTGTACCAAAGGCTGGCAATAGCGGGGGACGGGGAGTTCAACCTGGAAATCTATACATAAAACTGAAGGTTGCCAAAGATCCTATTTTCAATAGAGATGGTGCAGACGTTTATGTGGATTCTCATATAAGCTTTACACAAGCTATTCTTGGTGGTCGGGTTGACGTACCTACCTTATCTGGGAAGATGCAAGTAAAAATACCAAAGGGGGTTCAGCCAGGACAACTTGTGGTACTAAGAGGCAGAGGGTTGCCAAAACAAGGTGGTTTTATAGAATCTGTTGGTGATCTATACGTGCGATTCCGCGTCAGCTTTCCTACTTCGCTAAGTGAACGCCAACGTGCCCTGATGGAAGAATTTGCCGAGGAGGAGTGTAGTCATGGAAACAGTGCTTCTGTTGAAGGAAACTGGTGGCAGCAAATTGTTGATCGATTGTCGGGTCCCAGGTTTATGCTTGAAATCAGTTTATTCTTATTGATCCTCCTTGTGCTGAACAAAACCATGGGCTGA | 1455 | 0.4385 | MGRFGWLGFAPKSLSQVRRFHDVHRRLPSSVVTSEFSYDHGDRRCGYSLLRQTFFFTRTLYGCSFDITEKPAKFSTTRVSLIKRYFHATGLCNSRERDFYEILGVPKDATRDEIKKAFHVLAKKYHPDANKNNPAAKRKFQEIRDAYETLRDSEKRAQYDRGRTRGAPEGGYAARDTEGFGDAQEHFSDTFQKIFSEIFEHETEDFATEIQVELVLSFSEAAKGCQKHLSFDARVLCDSCNGRGHPIDAKPKVCPTCKGIGRVTLPPFTSTCNTCKGVGRIIKENCIACRGSGVVEGVKEVKVKIPAGVDSGDTIRVPKAGNSGGRGVQPGNLYIKLKVAKDPIFNRDGADVYVDSHISFTQAILGGRVDVPTLSGKMQVKIPKGVQPGQLVVLRGRGLPKQGGFIESVGDLYVRFRVSFPTSLSERQRALMEEFAEEECSHGNSASVEGNWWQQIVDRLSGPRFMLEISLFLLILLVLNKTMG* | 485 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g00787 | 484 | ProSitePatterns | Nt-dnaJ domain signature. | 140 | 159 | IPR018253 | - | |
Eupl03g00787 | 484 | Pfam | DnaJ central domain | 237 | 293 | IPR001305 | GO:0031072|GO:0051082 | |
Eupl03g00787 | 484 | PANTHER | DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED | 63 | 443 | - | - | |
Eupl03g00787 | 484 | SMART | dnaj_3 | 97 | 155 | IPR001623 | - | |
Eupl03g00787 | 484 | FunFam | Chaperone protein dnaJ 1, mitochondrial | 340 | 448 | - | - | |
Eupl03g00787 | 484 | Pfam | DnaJ C terminal domain | 210 | 421 | IPR002939 | - | |
Eupl03g00787 | 484 | CDD | DnaJ | 98 | 152 | IPR001623 | - | |
Eupl03g00787 | 484 | ProSiteProfiles | Zinc finger CR-type profile. | 224 | 298 | IPR001305 | GO:0031072|GO:0051082 | |
Eupl03g00787 | 484 | CDD | DnaJ_zf | 237 | 292 | IPR001305 | GO:0031072|GO:0051082 | |
Eupl03g00787 | 484 | PRINTS | DnaJ domain signature | 155 | 174 | IPR001623 | - | |
Eupl03g00787 | 484 | PRINTS | DnaJ domain signature | 118 | 133 | IPR001623 | - | |
Eupl03g00787 | 484 | PRINTS | DnaJ domain signature | 100 | 118 | IPR001623 | - | |
Eupl03g00787 | 484 | PRINTS | DnaJ domain signature | 135 | 155 | IPR001623 | - | |
Eupl03g00787 | 484 | Gene3D | DnaJ domain | 95 | 207 | IPR036869 | - | |
Eupl03g00787 | 484 | SUPERFAMILY | DnaJ/Hsp40 cysteine-rich domain | 224 | 295 | IPR036410 | - | |
Eupl03g00787 | 484 | Gene3D | - | 340 | 449 | - | - | |
Eupl03g00787 | 484 | Pfam | DnaJ domain | 98 | 160 | IPR001623 | - | |
Eupl03g00787 | 484 | SUPERFAMILY | Chaperone J-domain | 95 | 195 | IPR036869 | - | |
Eupl03g00787 | 484 | Gene3D | - | 208 | 337 | - | - | |
Eupl03g00787 | 484 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 210 | 352 | IPR008971 | GO:0006457|GO:0051082 | |
Eupl03g00787 | 484 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 345 | 432 | IPR008971 | GO:0006457|GO:0051082 | |
Eupl03g00787 | 484 | CDD | DnaJ_C | 305 | 424 | - | - | |
Eupl03g00787 | 484 | Hamap | Chaperone protein DnaJ [dnaJ]. | 95 | 465 | IPR012724 | GO:0005524|GO:0006457|GO:0009408|GO:0051082 | |
Eupl03g00787 | 484 | Gene3D | - | 233 | 266 | - | - | |
Eupl03g00787 | 484 | Gene3D | - | 267 | 301 | - | - | |
Eupl03g00787 | 484 | ProSiteProfiles | dnaJ domain profile. | 98 | 163 | IPR001623 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g00787 | Eupl-Chr3 | 28697195 | 28740376 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g00787 | 94 | 165 | C2H2 Transcription Factor Family | AT1G74250 | 38.961 | 1.38e-07 | 52.4 |