Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00787 ATGGGCAGATTTGGTTGGCTAGGGTTTGCACCAAAGTCTCTGTCCCAGGTTCGACGGTTTCATGACGTTCATCGGCGTTTGCCGTCTTCGGTGGTGACATCTGAGTTTTCTTATGATCATGGAGATCGGCGTTGTGGATATTCACTGTTGCGACAAACGTTCTTCTTCACGCGGACTTTATATGGTTGCAGTTTTGATATTACTGAGAAACCTGCCAAATTCTCAACCACTAGAGTATCATTGATAAAGCGGTATTTTCATGCTACAGGATTATGCAACTCAAGAGAACGGGACTTCTATGAAATCCTAGGTGTTCCTAAGGATGCTACTCGAGATGAAATAAAAAAGGCTTTTCATGTGCTTGCCAAGAAATACCATCCAGATGCAAATAAGAATAATCCTGCAGCAAAGAGGAAATTCCAAGAGATAAGGGATGCCTATGAGACCTTGCGTGATTCTGAAAAGCGAGCACAATATGATAGGGGGCGAACTAGAGGTGCTCCAGAAGGAGGATATGCTGCTAGAGATACAGAGGGATTTGGTGATGCTCAAGAGCATTTCTCTGATACATTCCAAAAAATTTTCTCTGAGATATTTGAACATGAGACAGAAGATTTTGCGACTGAGATACAGGTGGAGCTGGTACTCTCTTTTTCTGAAGCTGCTAAAGGCTGCCAAAAGCATCTGTCCTTTGATGCGCGTGTTCTTTGTGACTCCTGCAATGGACGTGGCCATCCAATTGATGCAAAGCCAAAAGTATGTCCAACATGTAAAGGCATTGGAAGAGTTACACTTCCTCCATTCACATCAACATGCAATACTTGTAAAGGAGTGGGCCGAATTATTAAGGAAAATTGTATAGCATGCAGAGGATCTGGGGTGGTTGAAGGTGTCAAGGAGGTTAAAGTTAAAATCCCAGCAGGTGTTGATTCTGGAGATACAATCCGTGTACCAAAGGCTGGCAATAGCGGGGGACGGGGAGTTCAACCTGGAAATCTATACATAAAACTGAAGGTTGCCAAAGATCCTATTTTCAATAGAGATGGTGCAGACGTTTATGTGGATTCTCATATAAGCTTTACACAAGCTATTCTTGGTGGTCGGGTTGACGTACCTACCTTATCTGGGAAGATGCAAGTAAAAATACCAAAGGGGGTTCAGCCAGGACAACTTGTGGTACTAAGAGGCAGAGGGTTGCCAAAACAAGGTGGTTTTATAGAATCTGTTGGTGATCTATACGTGCGATTCCGCGTCAGCTTTCCTACTTCGCTAAGTGAACGCCAACGTGCCCTGATGGAAGAATTTGCCGAGGAGGAGTGTAGTCATGGAAACAGTGCTTCTGTTGAAGGAAACTGGTGGCAGCAAATTGTTGATCGATTGTCGGGTCCCAGGTTTATGCTTGAAATCAGTTTATTCTTATTGATCCTCCTTGTGCTGAACAAAACCATGGGCTGA 1455 0.4385 MGRFGWLGFAPKSLSQVRRFHDVHRRLPSSVVTSEFSYDHGDRRCGYSLLRQTFFFTRTLYGCSFDITEKPAKFSTTRVSLIKRYFHATGLCNSRERDFYEILGVPKDATRDEIKKAFHVLAKKYHPDANKNNPAAKRKFQEIRDAYETLRDSEKRAQYDRGRTRGAPEGGYAARDTEGFGDAQEHFSDTFQKIFSEIFEHETEDFATEIQVELVLSFSEAAKGCQKHLSFDARVLCDSCNGRGHPIDAKPKVCPTCKGIGRVTLPPFTSTCNTCKGVGRIIKENCIACRGSGVVEGVKEVKVKIPAGVDSGDTIRVPKAGNSGGRGVQPGNLYIKLKVAKDPIFNRDGADVYVDSHISFTQAILGGRVDVPTLSGKMQVKIPKGVQPGQLVVLRGRGLPKQGGFIESVGDLYVRFRVSFPTSLSERQRALMEEFAEEECSHGNSASVEGNWWQQIVDRLSGPRFMLEISLFLLILLVLNKTMG* 485
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00787 484 ProSitePatterns Nt-dnaJ domain signature. 140 159 IPR018253 -
Eupl03g00787 484 Pfam DnaJ central domain 237 293 IPR001305 GO:0031072|GO:0051082
Eupl03g00787 484 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 63 443 - -
Eupl03g00787 484 SMART dnaj_3 97 155 IPR001623 -
Eupl03g00787 484 FunFam Chaperone protein dnaJ 1, mitochondrial 340 448 - -
Eupl03g00787 484 Pfam DnaJ C terminal domain 210 421 IPR002939 -
Eupl03g00787 484 CDD DnaJ 98 152 IPR001623 -
Eupl03g00787 484 ProSiteProfiles Zinc finger CR-type profile. 224 298 IPR001305 GO:0031072|GO:0051082
Eupl03g00787 484 CDD DnaJ_zf 237 292 IPR001305 GO:0031072|GO:0051082
Eupl03g00787 484 PRINTS DnaJ domain signature 155 174 IPR001623 -
Eupl03g00787 484 PRINTS DnaJ domain signature 118 133 IPR001623 -
Eupl03g00787 484 PRINTS DnaJ domain signature 100 118 IPR001623 -
Eupl03g00787 484 PRINTS DnaJ domain signature 135 155 IPR001623 -
Eupl03g00787 484 Gene3D DnaJ domain 95 207 IPR036869 -
Eupl03g00787 484 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 224 295 IPR036410 -
Eupl03g00787 484 Gene3D - 340 449 - -
Eupl03g00787 484 Pfam DnaJ domain 98 160 IPR001623 -
Eupl03g00787 484 SUPERFAMILY Chaperone J-domain 95 195 IPR036869 -
Eupl03g00787 484 Gene3D - 208 337 - -
Eupl03g00787 484 SUPERFAMILY HSP40/DnaJ peptide-binding domain 210 352 IPR008971 GO:0006457|GO:0051082
Eupl03g00787 484 SUPERFAMILY HSP40/DnaJ peptide-binding domain 345 432 IPR008971 GO:0006457|GO:0051082
Eupl03g00787 484 CDD DnaJ_C 305 424 - -
Eupl03g00787 484 Hamap Chaperone protein DnaJ [dnaJ]. 95 465 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl03g00787 484 Gene3D - 233 266 - -
Eupl03g00787 484 Gene3D - 267 301 - -
Eupl03g00787 484 ProSiteProfiles dnaJ domain profile. 98 163 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Eupl03g00787 Eupl-Chr3 28697195 28740376 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00787 94 165 C2H2 Transcription Factor Family AT1G74250 38.961 1.38e-07 52.4