Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00775 ATGGCCATCATCATCATCGTTCTCATAAGCGCCTTCTTCTTCATGGGTTTCTTCTCTATCTACATCCGCCAGTGCGCCGGCGATAATCGGATGGGCGGTTCTGTACGGCCGGCAAACGGTGCAATCGGACGGTCGCGACGGGCGGCACGCGGACTCGATCCTGCTGTGATCGAGACCTTCCCAACCTTCATCTACTCTGTTGTGAAGGGGCTCAAGATAGGCAAGGGCGCGCTAGAATGCGCTGTGTGTCTGAACGAGTTCGAAGACGACGAGACGCTTCGGTTGCTCCCTAAGTGCGACCACGTTTTCCATCCTGAGTGTATCGATGCTTGGTTGACTTCTCACACTACCTGCCCGGTCTGCCGTGCTAACCTCGTTCCGGAATCAGGCGAAGCCACGGGTGCTGCCGCTGTTACACAGGTGACGGATTCCGATAGCGAATCGGATGACGAGAACCGCGTATCGGACATCGACGACGAGCAAAACCAAGTCTCGATCCGTGTGATCGAAGATCAGAGCAGAGATCCACAACCCGAAGTCATAAACCTTGCTCAGATTCCAATCCAAAACCGTCCAGCGAGATCGAAATCGACAAGACCGCGAATCGCCGGAAAATTCCCGCGATCGCACTCGACTGGGCACTCGCTGGTCCAACCGGGAGAGAACTGCGAGAGATTTACGTTAAGGTTGCCGGAAGACGTGAGAAAGCAGATCGTGAGCGGAAAGCTGAACCGTACGATTAGCTGCATCACTTTTCCGACCGGAGATGGTTCAGTTTCCGGTGGAAGTACTCGCCGGGGTTACCGAAGCAGTGGCGAGGGTAGCAGTCGAGGGAAGAACTACCAGTTTGGGCGGTTGGACCGGGCGGCGAAGTCAGACCGGTGGGTGTTCTCGATGGCGCCACCCTTCTTCTCGAGGACAACGTCCGTTAAGTCGCCAAAGAGGTCTTCGTCCGTTAAGACGCCCGCCAAATGTGACGGCGACGCTCAAACGTCGTCTCGTCCTCCTGTTTGA 1014 0.5602 MAIIIIVLISAFFFMGFFSIYIRQCAGDNRMGGSVRPANGAIGRSRRAARGLDPAVIETFPTFIYSVVKGLKIGKGALECAVCLNEFEDDETLRLLPKCDHVFHPECIDAWLTSHTTCPVCRANLVPESGEATGAAAVTQVTDSDSESDDENRVSDIDDEQNQVSIRVIEDQSRDPQPEVINLAQIPIQNRPARSKSTRPRIAGKFPRSHSTGHSLVQPGENCERFTLRLPEDVRKQIVSGKLNRTISCITFPTGDGSVSGGSTRRGYRSSGEGSSRGKNYQFGRLDRAAKSDRWVFSMAPPFFSRTTSVKSPKRSSSVKTPAKCDGDAQTSSRPPV* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00775 337 MobiDBLite consensus disorder prediction 191 218 - -
Eupl03g00775 337 ProSiteProfiles Zinc finger RING-type profile. 80 122 IPR001841 -
Eupl03g00775 337 MobiDBLite consensus disorder prediction 305 337 - -
Eupl03g00775 337 SUPERFAMILY RING/U-box 77 128 - -
Eupl03g00775 337 MobiDBLite consensus disorder prediction 254 278 - -
Eupl03g00775 337 Pfam Ring finger domain 79 122 IPR001841 -
Eupl03g00775 337 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 127 IPR013083 -
Eupl03g00775 337 MobiDBLite consensus disorder prediction 254 284 - -
Eupl03g00775 337 FunFam E3 ubiquitin-protein ligase ATL6 41 128 - -
Eupl03g00775 337 CDD RING-H2_EL5-like 79 122 - -
Eupl03g00775 337 MobiDBLite consensus disorder prediction 133 158 - -
Eupl03g00775 337 PANTHER RING FINGER DOMAIN-CONTAINING 3 132 - -
Eupl03g00775 337 SMART ring_2 80 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00775 Eupl-Chr3 28484008 28485889 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00775 1 307 Rapid Response to Elicitors AT3G05200 49.196 6.62e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00775 K10664 - nnu:104604112 429.098