Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl03g00771 | ATGGCATTAGAAGCTGTTGTATTCCCACAAGACCTTCATACTTATGGTTGCAAGGATTTGTACTCCTTGGGAGGAGGTTGGAGCTATGACTTTGGTGTTAAAGAAGAAGAGAAAGGTTGTGGTGGTGGTAGTAATGGTGGTGTTGTTGAGACTCTTGAGACGAATATAGAGCAAGGTCTCCTTGGGAATTGGGATTCTTCTCCTTCTTCAATTGTTCACAATGTCAAGGAGTGGGAGATAAATTCGTCGCCGGAGGAGATTTGCACTGGTGATGATTTTCTTAAAGGAGGCTCCTCACCGATGCTAGCTCCGGCGACTACTCCGGGTCGTCGGAAGAGACGACGGACTAAAAGCTGTAAGAACAAGGAAGAGGTGGAGAATCAAAGGATGACCCACATTGTTGTCGAACGCAATCGCCGGAAGCAGATGAACGAGTACCTCGCTGTTCTCCGGTCTTTGATGCCTGCTTCTTACGTTCAAAGGAGTGACCAAGCATCTATAGTAGGGGGAGCCATTAATTTCGTGAAGGAACTCGAACAGCTCCTCCAATCTTTCGAGGCCCAGAAGAGAATAAAGCAACAATCCGACACGGGTTTCTCCTCTCCCTTCGCCGACTTCTTCACCTTCCCTCAATACTCCTCATGCTCGACTCACTGCAACAACCTGGCTGCAACAAACGAATCGGTGGCGGAGAATCGATCGGCCATCGCAGACATCGAAGTGACAATGGTCGAGAGCCATGCCAACCTCAAAGTACTATCAAGGAGACGACCTAAGCAGCTCTTGAGGATGGTAGTCGGGTTTCAAAATCTCCGCCTCACAGTTCTCCACCTCAACGTTACAACCGTTGATCAGATGGTTCTTTACTCTTTCAGCGTTAAGGTTGAGGAAGAGTGCCAACATACATCAGTGGATCAAATTGCCACAGCGGTTTATCAGATGCTAGAAAGGATTGAAGAGGAGGCTGCTGCGTTGAGTTGA | 981 | 0.4811 | MALEAVVFPQDLHTYGCKDLYSLGGGWSYDFGVKEEEKGCGGGSNGGVVETLETNIEQGLLGNWDSSPSSIVHNVKEWEINSSPEEICTGDDFLKGGSSPMLAPATTPGRRKRRRTKSCKNKEEVENQRMTHIVVERNRRKQMNEYLAVLRSLMPASYVQRSDQASIVGGAINFVKELEQLLQSFEAQKRIKQQSDTGFSSPFADFFTFPQYSSCSTHCNNLAATNESVAENRSAIADIEVTMVESHANLKVLSRRRPKQLLRMVVGFQNLRLTVLHLNVTTVDQMVLYSFSVKVEEECQHTSVDQIATAVYQMLERIEEEAAALS* | 327 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl03g00771 | 326 | CDD | bHLH_AtFAMA_like | 130 | 202 | - | - | |
Eupl03g00771 | 326 | SMART | finulus | 133 | 184 | IPR011598 | GO:0046983 | |
Eupl03g00771 | 326 | PANTHER | MAX DIMERIZATION, MAD | 102 | 322 | - | - | |
Eupl03g00771 | 326 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 127 | 194 | IPR036638 | GO:0046983 | |
Eupl03g00771 | 326 | Gene3D | - | 112 | 198 | IPR036638 | GO:0046983 | |
Eupl03g00771 | 326 | Pfam | Helix-loop-helix DNA-binding domain | 128 | 179 | IPR011598 | GO:0046983 | |
Eupl03g00771 | 326 | Coils | Coil | 175 | 195 | - | - | |
Eupl03g00771 | 326 | MobiDBLite | consensus disorder prediction | 93 | 126 | - | - | |
Eupl03g00771 | 326 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 127 | 178 | IPR011598 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl03g00771 | Eupl-Chr3 | 28403032 | 28404695 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl03g00771 | 1 | 295 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT1G72210 | 49.371 | 1.49e-75 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Eupl03g00771 | HLH | 4.7e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl03g00771 | - | - | nnu:104608628 | 488.034 |