Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00755 ATGAAGAGGCTGGGTAGCTCAGATTCACTGGGTGGTTTGATCTCCATCTGCCCATCCACAGAGGAGAAGAGTTTGGGAGGCAACAGCAACAACCATGTCTACAGTAGGGGATTTCAATCCATGTTGGATGGCTTAGATGAAGAAGACTGTGCAGAGGAATCCAGTCAGATCGCCGAGAAGAAAAGGCGATTAAGCGTCGATCAGGTGAAGGCCTTGGAGAAGAATTTCGAGGTTGAGAACAAACTTGAACCAGAGAGAAAAGTTAAACTTGCACAAGAACTAGGCTTGCAACCAAGACAAGTCGCTGTTTGGTTTCAGAATCGGCGAGCCCGGTGGAAAACCAAGCAATTGGAGAGAGACTATGGCGTTCTTAAAACAAATTACGATGCTCTTAAGCTCAATTTCGACGCTCTTCAACAAGACAAAGAAGCTCTACTTGCTGAGCTAAGAGAACTGAAATTAAAGCTCCAAGAAGAAAATACAGAGAGCAAAATCTCTGTTAAAGAAGAGATCTTGGTACCGGAGTACGAAAACAAAGTTGTTGATCATAGTAAGATCTCTGCTGCTGCGCTCGTAGGTTCAGGGACTACGGATACAAATCAAGATTGCTACAACAGCAACAATGGAGTTGGGGTTTCGGTGTATGGGGACTTCAAAGACGGCTCATCCGATAGCGATTCGAGCGCGATCTTAAACGAAGACAACAGCCCAAACAACGCAGCAATTTCTTCATCTGGGGTTCTTCAGCAAAACCAGCTTCTGATGTCTCCGGCTACATCTTCTCTCCGATTCAACTGCTCTTCTTCTTCTTCGCCTTCTTCGATCAATTGCTTTCAGTTCTCAGATTCTAAAACAATTTCGGCGAATACCCAGAAAGCATATCAACACCACTCATTCGTGAGGATGGAGGAGCACAATTTCTTTAGTGCAGAGGAGTCCTGCAATTTCTTCTCTGATGATCAAGCTCCGACCCTTCAATGGTACTCTCCTGATCAATGGAACTAA 1005 0.4488 MKRLGSSDSLGGLISICPSTEEKSLGGNSNNHVYSRGFQSMLDGLDEEDCAEESSQIAEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKTNYDALKLNFDALQQDKEALLAELRELKLKLQEENTESKISVKEEILVPEYENKVVDHSKISAAALVGSGTTDTNQDCYNSNNGVGVSVYGDFKDGSSDSDSSAILNEDNSPNNAAISSSGVLQQNQLLMSPATSSLRFNCSSSSSPSSINCFQFSDSKTISANTQKAYQHHSFVRMEEHNFFSAEESCNFFSDDQAPTLQWYSPDQWN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00755 334 CDD homeodomain 60 116 IPR001356 GO:0003677
Eupl03g00755 334 PRINTS Lambda-repressor HTH signature 86 95 IPR000047 GO:0003677
Eupl03g00755 334 PRINTS Lambda-repressor HTH signature 95 111 IPR000047 GO:0003677
Eupl03g00755 334 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 47 307 IPR045224 GO:0003700
Eupl03g00755 334 Coils Coil 128 166 - -
Eupl03g00755 334 Gene3D - 30 116 - -
Eupl03g00755 334 SUPERFAMILY Homeodomain-like 47 117 IPR009057 -
Eupl03g00755 334 SMART HOX_1 58 119 IPR001356 GO:0003677
Eupl03g00755 334 FunFam Homeobox-leucine zipper protein HAT5 53 117 - -
Eupl03g00755 334 Pfam Homeobox associated leucine zipper 115 157 IPR003106 GO:0006355|GO:0043565
Eupl03g00755 334 ProSiteProfiles 'Homeobox' domain profile. 55 115 IPR001356 GO:0003677
Eupl03g00755 334 Pfam Homeodomain 60 113 IPR001356 GO:0003677
Eupl03g00755 334 ProSitePatterns 'Homeobox' domain signature. 90 113 IPR017970 GO:0000981|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00755 Eupl-Chr3 28173929 28176437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00755 1 334 Homeobox Transcription Factor Family AT2G22430 44.444 1.27e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Eupl03g00755 Homeodomain 2.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00755 K09338 - nnu:104604320 438.343