Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00741 ATGGCAATCTTCCCATGTTGCATCATCTTCCGGAAAGCCTGCCTATTGAATGAAAACTCTCGTAACCACTCGATTATGGCGTTTGACTCCGATACAACGATGCCAATGCACATATTACACCATGACCCCTTGTGCAAAAGAAGACCTGTGAATCAAACTGTGATCTTTTTCATTCTTGGTCTGCTCAACCTGCTTGTTAGATTCCTCATCAAGCAACCATCTTCCTCATCATCCTCTCAATCTAACAGATACCCAGAGATATCTGGCTCTGAAGCCCTACAAAGACAACTCCAACAACTTTTCCATCTCCACGACTCAGGTCTAGATCAAGCATTCATAGATGCTCTCATACTCTTTCTCTACAAAGAGATAATAGGTCTGAAAGAGTCCTTTGATGTGTTATTTGTCTATGTGAATTCTCAGAAGAAGATAAGCTGA 438 0.4155 MAIFPCCIIFRKACLLNENSRNHSIMAFDSDTTMPMHILHHDPLCKRRPVNQTVIFFILGLLNLLVRFLIKQPSSSSSSQSNRYPEISGSEALQRQLQQLFHLHDSGLDQAFIDALILFLYKEIIGLKESFDVLFVYVNSQKKIS* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00741 145 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 53 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00741 Eupl-Chr3 27825965 27831602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00741 60 128 C3H Transcription Factor Family AT2G18650 50.725 8.30e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00741 - - msin:131255492 131.339