Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00739 ATGGAGAAAACCCCATTAGAGAAAACTTCAGGGAAATCTATACGATGCAAAGCTGCAATTTGTAGAAAGGCAGGAGAAGCTCTAGTGATAGAGGAGATTGAAGTAGCCCCACCTAAAGCTTGGGAAGTCCGGATCAAAATTCTCTGTACATCTCTGTGTCACAGTGATGTAACCTTTTGGAAAATGGAAGAGCCAAGAGGAGTTTTTCCGACGATTTTCGGACACGAGGCAGTCGGGGTTGTGGAGAGTGTCGGAGAGAATGTGGATGAGGTTAAAGAAGGAGACATTGTTGTTCCGGTATTCCTCGCCAATTGCGGCGACTGTGTAGATTGCAAGTCGGAGAAGAGTAACATTTGCTCGAAATTCCCATTCAGAGTTGCTGCAGGGATGCCGAGGGATGGGACGAGCAGATTTACGGATTCGAAAGGAGAGGTTTTACATAATTTCTTACGTGTATCGAGCTTCGTCGAGTATTCAGTGGTGGATGTCGCTCATGTCGCTAAGATCAATCATGAAATTCCTATAGACAAGGCCTGCTTGCTTAGTTGCGGGGTATCAACTGGAGTTGGAGCTGTGTGGAAGGTGGCGAACGTGGAAGCGGGATCGACAGTCGCCGTCTTTGGACTTGGAGCCGTCGGACTTGCGGTCGCGGAGGGTGCAAGAATACGTGGAGCTTCTAAAATTATCGGTATTGATTTGAATCCCGACAAATTAGAGATTGGGAAGAAATTCGGTGTGACCGACTTTATTAATCCAAATGAGTGTGGGGAAAAGCCCGTTAACGAGGTGATTAAAGAAATGACAGATGGAGGTGCTGACTATTGCTTCGAGTGCATAGGATTGGCTTCCTTGATGAATGACGCCTTCAGTAGTTGCCGTCCGGGTTGGGGCAAGACAGTGATATTGGGTGTGGAGATGCACGGGGCACCACTGAGCATTAGCTCCTATGAGATTCTGAGAGGCAAAACCATTACAGGTTCTTTGTTTGGAGGAATCAAAGCAAAGTCTGATATTCCCCTCCTCGCTAAAAGTTACCTAGACAAGGAGCTTCATTTGGATGAGTTCATTACTCACGAGATTGGATTCCAGGACATAAACAAAGCCTTTGATTTACTCATCCAAGGAAAAAGCCTTCGGTGCATAATTTGGATGGACAGATAG 1161 0.4634 MEKTPLEKTSGKSIRCKAAICRKAGEALVIEEIEVAPPKAWEVRIKILCTSLCHSDVTFWKMEEPRGVFPTIFGHEAVGVVESVGENVDEVKEGDIVVPVFLANCGDCVDCKSEKSNICSKFPFRVAAGMPRDGTSRFTDSKGEVLHNFLRVSSFVEYSVVDVAHVAKINHEIPIDKACLLSCGVSTGVGAVWKVANVEAGSTVAVFGLGAVGLAVAEGARIRGASKIIGIDLNPDKLEIGKKFGVTDFINPNECGEKPVNEVIKEMTDGGADYCFECIGLASLMNDAFSSCRPGWGKTVILGVEMHGAPLSISSYEILRGKTITGSLFGGIKAKSDIPLLAKSYLDKELHLDEFITHEIGFQDINKAFDLLIQGKSLRCIIWMDR* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00739 386 PANTHER ALCOHOL DEHYDROGENASE 11 382 - -
Eupl03g00739 386 Gene3D - 188 327 - -
Eupl03g00739 386 Pfam Alcohol dehydrogenase GroES-like domain 42 136 IPR013154 -
Eupl03g00739 386 SUPERFAMILY GroES-like 9 194 IPR011032 -
Eupl03g00739 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 173 347 IPR036291 -
Eupl03g00739 386 Gene3D - 19 379 - -
Eupl03g00739 386 FunFam Alcohol dehydrogenase 6 19 200 - -
Eupl03g00739 386 Pfam Zinc-binding dehydrogenase 211 332 IPR013149 -
Eupl03g00739 386 SUPERFAMILY GroES-like 334 383 IPR011032 -
Eupl03g00739 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
Eupl03g00739 386 FunFam S-(hydroxymethyl)glutathione dehydrogenase 188 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00739 Eupl-Chr3 27808940 27816790 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00739 42 372 Monolignol Biosynthesis Gene Families AT2G21730 28.235 1.10e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00739 K00121 - psom:113286746 636.336