Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00725 ATGGCTTCACCAATTAACGTTCCTAGATGGACCCCTAATCCAAGCCCAGCAAGATCACCTCGTCGTCAACCCGCGGCAAGACTGAGAGATGATGATTTGGAGATGGATAGTTTTGTTTCTGAAGAGGATGACATGTCCTATAGCATGGAGAGATTTTTCCCATTTAGCACTTGCTCTTCTCCACCTCCTCATCATCATCCTCTTCCTGCCCAACCTAGGGTTAACCACACTGAACATATCTTCAACGCGCCATCTTTACGAATTGATGGCCTGGAAAGCAAGAGTTCATCAATGGAGGTGGAAACAGTTCAATTGTCGAATCAGGTGTTGCAGGTGGACGGTGTTTTCTTGACATGGGAGGATTTATGGGTGACAGTCTCCAATGGGAAGAACGGGTGTCGACCCATCCTTCAAGGGCTTACTGGGTACGCTCAACCCGGCGAGGTCTTGGCCATTATGGGTCCTTCTGGTTGTGGCAAGTCGACTCTTCTCGATGCATTAGCAGGGAGATTAGGTTCACACACAAGGCAATCTGGCGAGGTGTTAGTCAATGGCCGAAAACAAAGGCTTGCTTTTGGGACTTCGGCTTATGTGACTCAAGATGATACTCTAATGACAACATTAACCGTTAGAGAAGCAGTTTACTACTCCGCTGAGCTCCAACTGCCAGACTCCATGCCGAGATCCGAGAAGAAAAAGAGAGCTGATGTAACAATAAGGGAGATGGGCCTGCAAGATGCCATAAACACAAGAATAGGAGGGTTGAGCAGCAAAGGCCTTAGCGGCGGTCAAAAGAGGAGAGTGAGCATTTGCATAGAGATCTTAACACGCCCAAAGCTTCTCTTCCTGGATGAGCCCACAAGTGGGCTCGACAGTGCAGCATCATACCATGTCATGAATAGAATTTTAGGCCTTGCTCGACAAAATGGAAGGACTATCATCGCATCCATCCATCAGCCAAGCAGTGAAGTCTTTGAACTCTTCCACAATCTGTGTCTTCTCTCCTCTGGTAGAACAATTTACTTTGGTCCCGCTTCCGCAGCGAACGAGTTTTTCGCGTTGAATGGCTTTCCATGCCCAACTATGAGGAACCCATCAGATCACTACCTTAGAACAATCAACAAAGATTTCGATCAAGACATTGAACAAGGCATTGGTGGCAAGTCAAGCAGCACTGAGGAATCAATTAACATTCTTGTAAAGTCATATAAATCATCTGAGATTTGCCAACAAGTTCAAAGTCGGGTAGCCGAGATGCATAAAAAGGAAGGAGGAGTATTGGAGAAGGGAAGTCAAGCTAGCTTCATTACCCAGTTCCTTGTTCTTACAAGAAGGTCCTTTGTGAACATGTATCGAGATTTAGGTTACTACTGGTTGCGCCTAGCAATCTACATTGCACTATGTGTATGTGTCGGCACAATCTTTTATGACGTTGGCCGCAGTTTCGGCTCAATTCAGGCTAGGGGATCCATGCTCATGTTTGTAGCTGCATTCTTGACTTTTATGGCAATTGGTGGATTCCCTTCTTTTGTGGAGGACATGAAGATATTTGGACGAGAAAGATTAAATGGGCACTATGGTGTTGCTGCTTTCGTCGTGGGCAACTCACTTTCTTCCATTCCTTACTTGCTTCTAATCTCTCTGATTCCTGGAGCCATAGCTTATTACCTTGTTGGCCTTCAAATAGGATTTGATCATTTTGTCTACTTTGCTCTGTTACTTTTCGTGTGTATGATGTTGGTTGAGAGCCTAATGATGATCGTCGCAAGTATCGTGCCGGATTTCCTCATGGGTATAATTACAGGAGCTGGAATTCAAGGGGTGATGATGTTGAATGGTGGCTTCTTTCGACTACCGAATGATCTTCCGAAGCCTTTCTGGAGATATCCAATGTACTTCATTGCCTTCCATAGGTACGCTAATGAAGGATTCTACAAGAATGAGTTTGAAGGGCTAACTTTCCCTAATAATGAAGCAGGAGGTCCGGCCATCATCAATGGTGAAGAAATTTTGAGAGATATATGGCAAATGCAAATGGGATACTCAAAATGGGTTGATCTTGGTGTCTTGTTTGGGATGGTGGTTCTATATCGACTCATGTTCTTTGGTATTATAAAGACTGTAGAAAAGGTTAAGCCCATTACCAGAGCTCTCCTTGCTGTCCCTCCCAAGCACACAAAACAGATCATGGAGAATCCTTCCTCTGTACCTTTAAATCAAGCAGCTCTCTAA 2232 0.4485 MASPINVPRWTPNPSPARSPRRQPAARLRDDDLEMDSFVSEEDDMSYSMERFFPFSTCSSPPPHHHPLPAQPRVNHTEHIFNAPSLRIDGLESKSSSMEVETVQLSNQVLQVDGVFLTWEDLWVTVSNGKNGCRPILQGLTGYAQPGEVLAIMGPSGCGKSTLLDALAGRLGSHTRQSGEVLVNGRKQRLAFGTSAYVTQDDTLMTTLTVREAVYYSAELQLPDSMPRSEKKKRADVTIREMGLQDAINTRIGGLSSKGLSGGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYHVMNRILGLARQNGRTIIASIHQPSSEVFELFHNLCLLSSGRTIYFGPASAANEFFALNGFPCPTMRNPSDHYLRTINKDFDQDIEQGIGGKSSSTEESINILVKSYKSSEICQQVQSRVAEMHKKEGGVLEKGSQASFITQFLVLTRRSFVNMYRDLGYYWLRLAIYIALCVCVGTIFYDVGRSFGSIQARGSMLMFVAAFLTFMAIGGFPSFVEDMKIFGRERLNGHYGVAAFVVGNSLSSIPYLLLISLIPGAIAYYLVGLQIGFDHFVYFALLLFVCMMLVESLMMIVASIVPDFLMGIITGAGIQGVMMLNGGFFRLPNDLPKPFWRYPMYFIAFHRYANEGFYKNEFEGLTFPNNEAGGPAIINGEEILRDIWQMQMGYSKWVDLGVLFGMVVLYRLMFFGIIKTVEKVKPITRALLAVPPKHTKQIMENPSSVPLNQAAL* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00725 743 SMART AAA_5 146 346 IPR003593 GO:0016887
Eupl03g00725 743 Pfam ABC-2 type transporter 437 649 IPR013525 GO:0016020|GO:0140359
Eupl03g00725 743 Gene3D - 115 440 IPR027417 -
Eupl03g00725 743 Pfam ABC transporter 138 288 IPR003439 GO:0005524
Eupl03g00725 743 MobiDBLite consensus disorder prediction 1 36 - -
Eupl03g00725 743 CDD ABCG_EPDR 114 343 - -
Eupl03g00725 743 FunFam ABC transporter G family member 11 115 402 - -
Eupl03g00725 743 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 102 724 - -
Eupl03g00725 743 Pfam ABC-2 type transporter 318 374 IPR043926 GO:0140359
Eupl03g00725 743 ProSitePatterns ABC transporters family signature. 260 274 IPR017871 GO:0005524|GO:0016887
Eupl03g00725 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 352 IPR027417 -
Eupl03g00725 743 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 361 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00725 Eupl-Chr3 27623985 27628810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00725 136 346 Calmodulin-binding Proteins AT2G36910 28.241 4.50e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00725 K05681 - nnu:104608659 1090.1