Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00724 ATGGCTTCACCCACTAACGTTCCTAGAGTGACCTCTAGTCCAAGCCCAACAGGCTCATCACGGCATGAGCCCATGAAAAGCGTGAGAAACGATGATCCGGAGATGCATATCTTCGCCACTGATCAAGAGGCTGACATGTCTTATAGCATGAAAAATATTTTCCCATCTACCACTTGCTCTTCTCTTCCATCACCTCCTCCTCAAGCAAGAGTTAGCAACGACTCTGAATACATCTACAACGTTCCGTCTCAACGAAATGTCCCAGAAATCAAAAGCTCGATAGAGGTGGAAACGGTTGAATTGCCAAACCAGCGGAGAGAGGAAAGTTTTGTTCCGACGGGGGACGGCGTTTTCTTGACATGGGAGGATCTTTGGGTGACAACGTCCAATCGAAAAGGCAACAGTCGATCGATCCTTCAAGGGCTCACTGGATATGTCCAACCTGGTGAGGTCTTGGCCATCATGGGTCCTTCTGGTTGTGGCAAGTCAACTCTTCTAGATGCTTTAGCAGGGAGATTAAGTTCAAACACAAGACAATCAGGAGAGGTTCTTGTCAATGGTCGAAAACAAACGCTTGCTTTCGGGACGTCGGCTTATGTGACTCAAGATGATTCTCTAATGACGACGCTAACCGTCAGAGAAGCCGTATACTACTCTGCTCAGCTCCAACTACCAGACTCCATGCCGAGATCCGAGAAGCTAGAGAGGGCAGAGACGACAATTAGGGAGATGGGCTTGCAGGATGCCATGAACACAAGAATAGGAGGGTGGGGTGACAAAGGCCTTAGTGGCGGGCAAAAGAGGAGAGTCACCATTTGCATCGAGATCTTAACCCGCCCGAAACTTCTCTTTCTAGACGAACCCACAAGTGGACTTGATAGTGCAGCATCATACCATGTCATGAAACGAATTGTAGAGCTTGCTCAACAAGACGGAAGGACTGTCATCGCATCCATCCATCAACCTAGCAGTGAAGTCTTTGAGCTCTTCCACAATCTTTGTCTCCTCTCCTCTGGTAGAACAATTTACTTTGGTTCCGCTTCTGCAGCGAACGAGTTTTTTGCGTTGAATGGTTTCCCATGCCCAACTATGAGGAACCCATCTGATCATTTCCTTAGAACAATCAACAAAGACTTTGATAAGGACATTGAACAAGGTTTTGGTGGGTCGACAACCACGGAGGAAGCGATCGACATTCTCGTAAAGTCGTATAAGTCATCTGAGACTTGCTGGCAAGTTGGAAGACGGGTAGCAGAGATACGTAGAAGGGAAGGAGTGATGTTGGAGAAGAAGGGAAGCCAAGCTAGCTTCATTACCCAGTCCCTCGTTCTTACAAGAAGATCCTTCGTCAACATGTATCGGGATCTTGGCTACTACTGGTTGCGATTTGCAATTTATATTGCACTGTGTTTATGTTTGGGCACCGTCTATTATGACATTGGCCACAGTTATGGCTCAATTCAGGCTAGATGTTCGATGCTCATGTACATAGCTACACTCATGACATTCATGGCAATTGGTGGATTCCCTTCTTTTGTTGAGGACATGAAGATCTTTGGAAGAGAAAGATTGAATGGACACTATGGTGTTGCTGCTTTCGTTGTGGGCAATTCGCTTTCTTCCATTCCCTACTTGTTTATAATCTCTCTGATTCCTGGAGCCATGGCTTATTACCTTGTTGGCCTTCAAAAAGGAATTGATCATTTTGGTTGCTTTGCTTTGCTACTTTTCGTGTGTACGATGTTGGTTGAGAGCCTAATGATGACCGTCGCAAGTATCGTGCCAAATTACCTCATGGGCATAATTGCAGGAGCTGGAATTCAAGGGGTGATGATGTTAAATGGTGGTTTCTTTCGACTGTCGAATGATCTCCCCAAGATTTTCTGGAGATATCCAATGTACTACATCGCCTTCCATACCTATGCTAATGAAGGATTCTACAAGAATGAATTTGAAGGGCTAACTTTCCCTAATAATCAAGCACATCCGGCCACCATCACTGGTGAAGAAGTTTTGAGAGATATCTGGAAAATGAATATGGGCTACTCTAAATGGGTTGATATTTCTGTCTTGTTAGGGATGGTGGTTCTATATAGACTCATGTTCTTTGGTATTATAAAGACTGAAGAAAAGGTAAAGCCCATTATTCGAGCTCTCCTAGCAGTCCCTTCCAAGAACGCGAAAAAGATCATGGAGAACCCCTCCGCTACACCTTTACATGAAGCAACTCTGTAG 2235 0.4523 MASPTNVPRVTSSPSPTGSSRHEPMKSVRNDDPEMHIFATDQEADMSYSMKNIFPSTTCSSLPSPPPQARVSNDSEYIYNVPSQRNVPEIKSSIEVETVELPNQRREESFVPTGDGVFLTWEDLWVTTSNRKGNSRSILQGLTGYVQPGEVLAIMGPSGCGKSTLLDALAGRLSSNTRQSGEVLVNGRKQTLAFGTSAYVTQDDSLMTTLTVREAVYYSAQLQLPDSMPRSEKLERAETTIREMGLQDAMNTRIGGWGDKGLSGGQKRRVTICIEILTRPKLLFLDEPTSGLDSAASYHVMKRIVELAQQDGRTVIASIHQPSSEVFELFHNLCLLSSGRTIYFGSASAANEFFALNGFPCPTMRNPSDHFLRTINKDFDKDIEQGFGGSTTTEEAIDILVKSYKSSETCWQVGRRVAEIRRREGVMLEKKGSQASFITQSLVLTRRSFVNMYRDLGYYWLRFAIYIALCLCLGTVYYDIGHSYGSIQARCSMLMYIATLMTFMAIGGFPSFVEDMKIFGRERLNGHYGVAAFVVGNSLSSIPYLFIISLIPGAMAYYLVGLQKGIDHFGCFALLLFVCTMLVESLMMTVASIVPNYLMGIIAGAGIQGVMMLNGGFFRLSNDLPKIFWRYPMYYIAFHTYANEGFYKNEFEGLTFPNNQAHPATITGEEVLRDIWKMNMGYSKWVDISVLLGMVVLYRLMFFGIIKTEEKVKPIIRALLAVPSKNAKKIMENPSATPLHEATL* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00724 744 ProSitePatterns ABC transporters family signature. 262 276 IPR017871 GO:0005524|GO:0016887
Eupl03g00724 744 Pfam ABC-2 type transporter 440 651 IPR013525 GO:0016020|GO:0140359
Eupl03g00724 744 CDD ABCG_EPDR 116 345 - -
Eupl03g00724 744 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 119 363 IPR003439 GO:0005524
Eupl03g00724 744 MobiDBLite consensus disorder prediction 1 34 - -
Eupl03g00724 744 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 101 727 - -
Eupl03g00724 744 SMART AAA_5 148 335 IPR003593 GO:0016887
Eupl03g00724 744 FunFam ABC transporter G family member 11 117 403 - -
Eupl03g00724 744 Gene3D - 117 376 IPR027417 -
Eupl03g00724 744 MobiDBLite consensus disorder prediction 1 23 - -
Eupl03g00724 744 Pfam ABC-2 type transporter 320 374 IPR043926 GO:0140359
Eupl03g00724 744 Pfam ABC transporter 139 290 IPR003439 GO:0005524
Eupl03g00724 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 354 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00724 Eupl-Chr3 27564073 27613275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00724 138 348 Calmodulin-binding Proteins AT2G36910 29.630 1.45e-12 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00724 K05681 - nnu:104608659 1057.36