Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00721 ATGGCCCAAGCTTCTTCATCTTCAGCTCCCGAACCAGAGCACGAACACGAACCCTCATCACACGAGCCCCAGCCCTCACCTCCCAAGAAAACCCCTCCCCTCCCATGGTCCCACCTCGAGACCGTACACCTCATCGAGTCGTACCAAGAGAAATGGTACTCTCTGAAACGGGGCCAACTCAAGGCCAGCCAATGGGAAGAAGTCGCGGTCTCCGTCGCCGCTCGCTGCGGCTACGAAGAGCCCTCCAAAACCGCCACACAGTGCCGCCACAAGATGGAGAAGCTCCGGAAGCGCTACCGCTCCGAGAAGCAGCGCTCCTCCCAATCCTCTTGGCCCTATTTCTATCTCATGGACCTCATGGAACGCGGGCCTTTCCCAATCTCCGCCCGTCCGATCCCCTCGATCGTACCACATCATCGCAGTTCCAATTCAACCGAAGACGATGATGATGCCGATGACGAGGATGCGGATGAGACAAATAAATCTCGAAGCATCAATCACATACTCCGTAGAAATCCAACTGTGTCTCCCGTTGTCGATAAGTCGTCATTGCTTCGGCAATGGAACAGTGGTGGTGGAGGTGCAGGACCAGGGGTTTCTAGGTTTTTGAGGAATCCGATGTTTCGGAAGAGGAGAAAGTCTTTTGAGATCGATGAGGACGAGGAGGAAGGAGGAGAGCCGCTTTCTGAATTGGCTTCAGTGATTCAAGCATTCGGAGAAGGTTTTGTTAGGATAGAGAATTTGAGGATGGAGATGATGAAGGAGACAGAGAGGTATCGGATGGAAATGGAGAAAAAGAGGACAGAGATGATTCTTGAATCACAGCGTCACCTTGTAGATGCAATTGCTAAGGCCCTTGGCTCTCAGAAGAAGTCGAAGAAGAATCTGGAGATGTGA 897 0.524 MAQASSSSAPEPEHEHEPSSHEPQPSPPKKTPPLPWSHLETVHLIESYQEKWYSLKRGQLKASQWEEVAVSVAARCGYEEPSKTATQCRHKMEKLRKRYRSEKQRSSQSSWPYFYLMDLMERGPFPISARPIPSIVPHHRSSNSTEDDDDADDEDADETNKSRSINHILRRNPTVSPVVDKSSLLRQWNSGGGGAGPGVSRFLRNPMFRKRRKSFEIDEDEEEGGEPLSELASVIQAFGEGFVRIENLRMEMMKETERYRMEMEKKRTEMILESQRHLVDAIAKALGSQKKSKKNLEM* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00721 298 Coils Coil 85 105 - -
Eupl03g00721 298 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 14 289 IPR044823 -
Eupl03g00721 298 MobiDBLite consensus disorder prediction 1 36 - -
Eupl03g00721 298 Gene3D - 36 101 - -
Eupl03g00721 298 MobiDBLite consensus disorder prediction 130 173 - -
Eupl03g00721 298 SMART 118neu2 43 125 IPR006578 -
Eupl03g00721 298 Pfam Myb/SANT-like DNA-binding domain 35 119 IPR044822 -
Eupl03g00721 298 Coils Coil 245 265 - -
Eupl03g00721 298 FunFam Trihelix transcription factor ASIL2 36 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00721 Eupl-Chr3 27453066 27456111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00721 36 120 Trihelix Transcription Factor Family AT3G14180 34.831 2.00e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl03g00721 Myb_DNA-bind_4 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00721 - - nnu:104608663 401.364