Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00706 ATGAACCAAATAACGAAGGTTGTTGTCCTTCAACCAACATATTCTCCATCTACGGCACAATCCAGCCTATTAAAGAAGGTGATCGACAAGCACCCCTCTGCCCCCATACTAGTATTCCTCTATAGCATGGAGTTCTCCATAATTTCAAGTAACTCAAGCTCCTTAGCTAAAACTGAAAACTCTCTCCAACCCCTACCATTACTAAGCTGCCTGCTTCGCTCACCGGCCGAAGAAAATCATGAAACAAGCAATGAAGATGGCAATGGGATGATCACTGTGGCTTTACACATTGGCCTTCCTAATTGTTCAAATGACTATGAAAAGAGAGAGAGGAATGTAGTGGCTCCCCAGTATTGGATACCGACTCCTACGGAGATACTCATCGGCTTCACCAACTTCTCCTGTCATGTATGCAAGAAAACCTTCAACCGCTACAACAACTTGCAGATGCACATGTGGGGACATGGGTCCCAATATCGTAGAGGGCCAGAGTCGCTGAGGGGAGCTCAGCCTAGAGCAATTTTAAGCATCCCTTGCTATTGCTGTGCAGTAGGCTGCAAAAACAACATTGATCACCCCAAAGCGAAGCCACTCAAAGACTTCCGAACGTTGCAAACGCATTACAAGAGGCGGCATGGGATGAAACCATTTATGTGTTGCAAGTGCGGGAAGTTCTTGGCTGTGAAAGGCGATTGGCGAACCCATGAGAAAAATTGTGGGAAGCTTTGGCATTGCGTGTGCGGTTCGGACTTCAAGCATAAGAGATCACTCAAGGATCACATCAGAGTATTTGGCTCGGGTCATGGCCCTTTTCCTGCTTCAATTGATGGCATAGAAGAGGTATATGAGGACAATGTAGCTTCCCTGTCAATTTAA 876 0.4612 MNQITKVVVLQPTYSPSTAQSSLLKKVIDKHPSAPILVFLYSMEFSIISSNSSSLAKTENSLQPLPLLSCLLRSPAEENHETSNEDGNGMITVALHIGLPNCSNDYEKRERNVVAPQYWIPTPTEILIGFTNFSCHVCKKTFNRYNNLQMHMWGHGSQYRRGPESLRGAQPRAILSIPCYCCAVGCKNNIDHPKAKPLKDFRTLQTHYKRRHGMKPFMCCKCGKFLAVKGDWRTHEKNCGKLWHCVCGSDFKHKRSLKDHIRVFGSGHGPFPASIDGIEEVYEDNVASLSI* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00706 291 FunFam Zinc finger protein WIP2 186 268 - -
Eupl03g00706 291 PANTHER ZINC FINGER PROTEIN WIP2 45 278 IPR043584 GO:0003700|GO:0010468
Eupl03g00706 291 SUPERFAMILY beta-beta-alpha zinc fingers 129 155 IPR036236 -
Eupl03g00706 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 133 160 IPR013087 -
Eupl03g00706 291 SUPERFAMILY beta-beta-alpha zinc fingers 199 237 IPR036236 -
Eupl03g00706 291 Gene3D Classic Zinc Finger 132 155 - -
Eupl03g00706 291 ProSitePatterns Zinc finger C2H2 type domain signature. 135 155 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00706 Eupl-Chr3 27182277 27183248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00706 91 275 C2H2 Transcription Factor Family AT1G34790 67.317 2.00e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl03g00706 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00706 - - tcc:18592138 360.147