Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00705 ATGGCTTACCAAAATTACCGGTCGCAATTCGGAGACACGACGTTTACGAAGGTGTTCGTTGGAGGATTGGCTTGGGAGACGCCGACGGACGAAATGCATCGGTATTTCGAGCAATTTGGAGAGATTCTTGAGGCTGTTATCATCACCGATAAGAATACGGGAAGATCTAAAGGATACGGATTTGTGACTTTTCGTGACCCCGATTCGGCAAGGAGGGCTTGCATCGATCCGAACCCTGTGATCGATGGGAGGAAGGCGAATTGTAACATCGCTTCTTTGGGTCGGCCTCGACCTTCCCCACCACGAGGGAGAACACATGGTGGTAATCCCTACCATGGAGCCGGATCACCGGGTGCAACATCATATAACCGACTACCAGCACCATTAGCTCCTCCTCCTCCACCACTACCTCCGGTCATTTATCCTCCTTATGGGTACACCACTTACCCGTCAGATTTTGGATATCACCAAGCACTTTACAACCCACATTTTCAACAACAATATTACCATCAAGTGTACGGAACGTCATCATCGACCATTGGATCCCCACATTATTATGGGTATTCTTTGCAAGCTCCTAGGGGAACTTTTTCTGCCACCCAGGCGCACAGTATCCGGGGACCCTCTTATATGTACTATCCTACACAGGGGGAGGGGTCCTACTCCTACACTACCTTTCCACCACCAGCAGGTCCAGCACCAGCGAGGCAACCCATGCCCTTATCCACCGATACACAGGCTCCGCTACAAACCTCAACAAGAAGTGGAGCCACTGGTACGGAGAGTCCGGACACCTGA 798 0.51 MAYQNYRSQFGDTTFTKVFVGGLAWETPTDEMHRYFEQFGEILEAVIITDKNTGRSKGYGFVTFRDPDSARRACIDPNPVIDGRKANCNIASLGRPRPSPPRGRTHGGNPYHGAGSPGATSYNRLPAPLAPPPPPLPPVIYPPYGYTTYPSDFGYHQALYNPHFQQQYYHQVYGTSSSTIGSPHYYGYSLQAPRGTFSATQAHSIRGPSYMYYPTQGEGSYSYTTFPPPAGPAPARQPMPLSTDTQAPLQTSTRSGATGTESPDT* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00705 265 FunFam RNA-binding protein 24-B isoform X1 3 110 - -
Eupl03g00705 265 SUPERFAMILY RNA-binding domain, RBD 11 118 IPR035979 GO:0003676
Eupl03g00705 265 Gene3D - 3 111 IPR012677 -
Eupl03g00705 265 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 93 IPR000504 GO:0003723
Eupl03g00705 265 PANTHER BOULE-RELATED 6 239 - -
Eupl03g00705 265 MobiDBLite consensus disorder prediction 239 265 - -
Eupl03g00705 265 SMART rrm1_1 17 89 IPR000504 GO:0003723
Eupl03g00705 265 MobiDBLite consensus disorder prediction 222 265 - -
Eupl03g00705 265 CDD RRM_RBM24_RBM38_like 16 91 - -
Eupl03g00705 265 MobiDBLite consensus disorder prediction 91 129 - -
Eupl03g00705 265 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00705 Eupl-Chr3 27160659 27163916 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00705 12 193 C2H2 Transcription Factor Family AT2G19380 29.121 4.26e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00705 K25006 - tcc:18592140 372.089