Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00704 ATGGCTTTCCGAACACATGAGGCACATTACAAGTTCCTCGTAATGCCTTTGGGATATAATTTTTCGATGGCAATTATACCTTGTGGAAGTACATGGGTGGCCCAGTGGGGGGTTCGGCCTCAATTTATGTTAAGATCGTCCATCACAAACAAGAGGCTGACGTCTCAATATGGTGTTTCAAGCAAGATAAAATGTTTGGCCTCAACAGGTTCAAGCTTATTTTCTCAAGACTCCTTGCATGCATTCTTTAGTACGGGGTCATCTCAATATATGCATCGGCGTAGGGGAGCACGGCTTATTGTTAGAGCTGATAATGATTTCTATTCTCTCCTTGGGGTTTCCAAAAATGCCAGTAAATCTGAAATAAAAAGTGCTTACCGGAAGCTTGCTAGGACTTATCATCCAGATGTGAACAAAGAATCTGGAGCAGAACAAAAATTTAAGGATATCAGCAACGCCTATGAGGTATTGTCGGATGATGAGAAACGGTCCTTATATGACAAGTATGGAGAGGCGGGGCTTAAAGGTGCCGGTATGGGCACGGGGGATTTCAGCAATCCCTTTGATCTCTTTGAGTCATTATTCGAGGGCATGGGCGGTATGGGGGGCATGGGCATGGGTGGAGGGAGAGGTTCCAGAAATAGGGCAGTGGAAGGTGAGGATGAGATTTACAATCTCGTCTTGAATTTCAAGGAAGCAGTTTTTGGGGTAGAAAAAGAGATTGAGATAACCCGGCTGGAGAGCTGTAGCACCTGCAATGGGTCAGGTGCCAAACCAGGGACCAATCCATCCAAATGTAGTACATGTGGGGGCCAAGGCCAGGTTGTCTCATCGGCGAGGACCCCATTGGGTGTCTTCCAGCAGGTGATGACCTGTCCAGCTTGCAGTGGAATGGGGGAATCGTACACTCCTTGCAACACGTGTGGTGGGGATGGGCGAGTGAGGAGGACAAAGCGGATTAGTCTGAAAGTTCCAGCTGGTGTGGACTCTGGTAGCCGGTTGAGGGTTCGATCGGAAGGTAGTGCTGGAAGGAGAGGTGGGCCCTCAGGAGACCTTTTTGTTATTATTGAAGTTCTCTCGGACCCTGTGCTCAAACGTGATGATACCAACATCCTCTACACCTGTAAGGTGTCGTACATTGATGCAATCTTAGGGACGACAATCAAGGTTCCAACAGTGGATGGCATGGTTGATTTAAAGATCCCAGCTGGGACCCAACCAAGCACGACACTGGTGATGGCAAAGAAAGGTGTGCCTCTACTCAATAAAAACAACAGGAGAGGAGATCAGTTAGTACGTGTGCAAGTCGAGATCCCAAAAAGGCTGAGTGGCGAAGAGAGGAAGCTGATTGAAGACCTTGCCAACCTCAATAAGGCCAAGACTGCAAATGCTAGAAGATAG 1401 0.4775 MAFRTHEAHYKFLVMPLGYNFSMAIIPCGSTWVAQWGVRPQFMLRSSITNKRLTSQYGVSSKIKCLASTGSSLFSQDSLHAFFSTGSSQYMHRRRGARLIVRADNDFYSLLGVSKNASKSEIKSAYRKLARTYHPDVNKESGAEQKFKDISNAYEVLSDDEKRSLYDKYGEAGLKGAGMGTGDFSNPFDLFESLFEGMGGMGGMGMGGGRGSRNRAVEGEDEIYNLVLNFKEAVFGVEKEIEITRLESCSTCNGSGAKPGTNPSKCSTCGGQGQVVSSARTPLGVFQQVMTCPACSGMGESYTPCNTCGGDGRVRRTKRISLKVPAGVDSGSRLRVRSEGSAGRRGGPSGDLFVIIEVLSDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPSTTLVMAKKGVPLLNKNNRRGDQLVRVQVEIPKRLSGEERKLIEDLANLNKAKTANARR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00704 466 CDD DnaJ_zf 249 312 IPR001305 GO:0031072|GO:0051082
Eupl03g00704 466 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 68 463 - -
Eupl03g00704 466 ProSiteProfiles dnaJ domain profile. 106 170 IPR001623 -
Eupl03g00704 466 SUPERFAMILY HSP40/DnaJ peptide-binding domain 216 372 IPR008971 GO:0006457|GO:0051082
Eupl03g00704 466 Coils Coil 450 466 - -
Eupl03g00704 466 ProSiteProfiles Zinc finger CR-type profile. 236 317 IPR001305 GO:0031072|GO:0051082
Eupl03g00704 466 FunFam Chaperone protein dnaJ 1, mitochondrial 359 466 - -
Eupl03g00704 466 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 236 315 IPR036410 -
Eupl03g00704 466 PRINTS DnaJ domain signature 162 181 IPR001623 -
Eupl03g00704 466 PRINTS DnaJ domain signature 126 141 IPR001623 -
Eupl03g00704 466 PRINTS DnaJ domain signature 142 162 IPR001623 -
Eupl03g00704 466 PRINTS DnaJ domain signature 108 126 IPR001623 -
Eupl03g00704 466 Pfam DnaJ domain 106 167 IPR001623 -
Eupl03g00704 466 SUPERFAMILY HSP40/DnaJ peptide-binding domain 364 450 IPR008971 GO:0006457|GO:0051082
Eupl03g00704 466 NCBIfam molecular chaperone DnaJ 106 455 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl03g00704 466 FunFam Molecular chaperone DnaJ 241 317 - -
Eupl03g00704 466 Pfam DnaJ central domain 249 312 IPR001305 GO:0031072|GO:0051082
Eupl03g00704 466 SUPERFAMILY Chaperone J-domain 103 210 IPR036869 -
Eupl03g00704 466 ProSitePatterns Nt-dnaJ domain signature. 147 166 IPR018253 -
Eupl03g00704 466 CDD DnaJ_C 220 442 - -
Eupl03g00704 466 Gene3D - 249 312 - -
Eupl03g00704 466 Gene3D - 219 354 - -
Eupl03g00704 466 Hamap Chaperone protein DnaJ [dnaJ]. 103 462 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Eupl03g00704 466 FunFam Putative Mitochondrial DnaJ chaperone 306 354 - -
Eupl03g00704 466 Pfam DnaJ C terminal domain 224 439 IPR002939 -
Eupl03g00704 466 Gene3D DnaJ domain 103 205 IPR036869 -
Eupl03g00704 466 SMART dnaj_3 105 162 IPR001623 -
Eupl03g00704 466 FunFam Chaperone protein dnaJ A6 chloroplastic 103 206 - -
Eupl03g00704 466 CDD DnaJ 106 159 IPR001623 -
Eupl03g00704 466 Gene3D - 360 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00704 Eupl-Chr3 27126256 27141888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00704 108 169 C2H2 Transcription Factor Family AT1G74250 42.647 1.08e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00704 K03686 - nnu:104604682 722.62