Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00694 ATGATCCAATGTATTTATCACTGGGAAAAATCATCAAAGATGGGATTGGTTTATGCAGTTCTGATGTTGGCTTCTATGCATTGTTTTGTGGCATCGAATGATCAAGTGGACGCACTGATTTCGTTGAAGACTTCATTGAATGCTTCTCCCTCTCAGCTCCAAAATTGGGAATCTTATCTAGTTAATCCGTGCAGTTGGACAAATGTTGATTGTGACGATAATAGTAATGTCATTTCTGTAACATTGTCATCCATGGGGTTTTCTGGGATCTTATCACCCAAAATTGGAGTTCTGAAGACTCTTACCTTCCTTTCGTTGCAAGGTAACAACATAACTGGTAAGATACCAGAGGAGTTTGGAAACTTGTCTAGTCTGACAAGATTGGATTTGGAGAATAACCAGTTGACTGGAGAAATACCATCTTCCCTTGGCAATCTTAAAAATCTTCAATTATTGCTTTTGAGTCAAAACAATCTCCGTGGAAATATTCCCAAGTCAATTGCAAATATTCCAAGCTTGGCCGATCTTCAGCTTGCTTCCAATGATCTCAGCGGTCCAGTACCTGATCGTTTATTTCAAGTCCCAAAATACAATTTTACAGGTAACACCTTGAATTGTGGCAAAAATTTTCCACACCCTTGTACGTCTGATACTAATGTTACAGGCACTTCCCATAAATCAAAGCTTGGAATTATTATTGGAAGTATTGGAGGAGTAATAGGGCTCGTCCTTATTGGAGGCGTGATATTTCTTCTTCGGAAGGGTAGGCATAAGGGCTACAGGAGTGAAGTTTTTGTAGATGTTCCAGGCGAAGTTGACCGAAGAATTGCATTTGGGCAGTTGAAAAGATTTGCATGGCGAGAGCTACAATTGGCTACCGACAGCTTCAACGAGAAAAATGTTCTTGGCCAGGGAGGTTTCGGGAAGGTGTATAAAGGAGTGCTTGCAGATAGTACAAAAATTGCTGTAAAACGACTGACTGATTATGAAAGTCCTGGTGGAGAGCAAGCTTTCCTACGTGAAGTTGAGATGATAAGTGTAGCAGTTCACAGGAACCTTTTAAGGTTGATTGGGTTTTGTACAACACCATCAGAACGACTTTTGGTTTATCCCTTTATGCAGAACCTAAGTGTCGCACGTCGTTTAAGAGAAGTTAAACCTGGGGAGCCAGTGTTAGATTGGCCTACTAGAAAGCGAGTGGCTTTAGGCACAGCTCGTGGACTAGAGTACCTTCATGAACATTGCAATCCCAAGATTATTCATCGTGATGTTAAGGCAGCTAATGTATTACTAGATGAAGATTTTGAAGCTGTTGTGGGGGACTTTGGCCTGGCGAAATTGGTGGACGTAAGAAAGACTAATGTCACAACTCAAGTTCGTGGGACTATGGGCCATATCGCACCTGAATATATATCCACTGGAAAGTCATCAGAGAGGACTGATGTTTTTGGCTACGGGGTTATGCTTTTGGAACTTATAACAGGACAACGTGCAATAGATTTTTCACGGTTGGAGGAAGAAGATGATGTGTTATTGCTTGACCATGTGAAGAAGCTGGAAAGGGAGAAAAGATTAGATGATATTGTGGACTGCAACCTAAATAGGAATTACCACATTCAAGAAGTGGAGATGATGATAAAAGTCGCATTGCTCTGTACCCAAGCATCACCCGAGGACCGTCCAATGATGTCAGAGGTGGTACGGATGCTAGAAGGGGAAGGGCTGGCTGAGAGGTGGGAAGAGTGGCAGCAGGTGGAGGTTACTCGTAGACAAGAGCACGAAAGACTGCGGAGGAGATTTGACTGGGGAGGAGAAGATTCAATATATAACCAGGATGCAATCGAATTGTCCGGTGGAAGATGA 1863 0.4235 MIQCIYHWEKSSKMGLVYAVLMLASMHCFVASNDQVDALISLKTSLNASPSQLQNWESYLVNPCSWTNVDCDDNSNVISVTLSSMGFSGILSPKIGVLKTLTFLSLQGNNITGKIPEEFGNLSSLTRLDLENNQLTGEIPSSLGNLKNLQLLLLSQNNLRGNIPKSIANIPSLADLQLASNDLSGPVPDRLFQVPKYNFTGNTLNCGKNFPHPCTSDTNVTGTSHKSKLGIIIGSIGGVIGLVLIGGVIFLLRKGRHKGYRSEVFVDVPGEVDRRIAFGQLKRFAWRELQLATDSFNEKNVLGQGGFGKVYKGVLADSTKIAVKRLTDYESPGGEQAFLREVEMISVAVHRNLLRLIGFCTTPSERLLVYPFMQNLSVARRLREVKPGEPVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYISTGKSSERTDVFGYGVMLLELITGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDDIVDCNLNRNYHIQEVEMMIKVALLCTQASPEDRPMMSEVVRMLEGEGLAERWEEWQQVEVTRRQEHERLRRRFDWGGEDSIYNQDAIELSGGR* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00694 620 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00694 620 Pfam Protein kinase domain 296 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00694 620 FunFam Somatic embryogenesis receptor-like kinase 1 373 590 - -
Eupl03g00694 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Eupl03g00694 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 581 - -
Eupl03g00694 620 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Eupl03g00694 620 SUPERFAMILY L domain-like 32 197 - -
Eupl03g00694 620 FunFam Somatic embryogenesis receptor kinase 1 265 372 - -
Eupl03g00694 620 Gene3D Ribonuclease Inhibitor 32 216 IPR032675 -
Eupl03g00694 620 Gene3D Transferase(Phosphotransferase) domain 1 373 590 - -
Eupl03g00694 620 ProSiteProfiles Protein kinase domain profile. 296 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00694 620 Gene3D Phosphorylase Kinase; domain 1 265 372 - -
Eupl03g00694 620 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Eupl03g00694 620 SUPERFAMILY Protein kinase-like (PK-like) 276 571 IPR011009 -
Eupl03g00694 620 FunFam Putative LRR receptor-like serine/threonine-protein kinase 32 216 - -
Eupl03g00694 620 Pfam Leucine rich repeat 124 183 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00694 Eupl-Chr3 26890683 26960142 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00694 13 620 Receptor kinase-like Gene Family AT5G10290 73.684 0.0 891
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Eupl03g00694 Pkinase 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00694 - - ming:122069438 944.11