Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00691 ATGGCTGAGCTACCTTCACCTAAAACTCCCATAGCTACTGAACTCTCAGACATGGAAGAAGGGAAAACCAGTCCTCAGGGCTCTCTGGTTAATTTCGAGTCTCCGACTTACACTCACAAGGCAAGTCCATCATATCGTCGTCGTCGTCATCATTGTTGCGCTGTCATTATGTATTATCAAAATCTTAATATTTGCTTTTATGTACAGATTATTGCGGAGCTCGTGGGTACGTACATTCTTATATTCATAGGATGCGGGTCGATTCTTGTCGATAAGAAGCACAATATCACAATCATGGGTATAGCAGTGGCGTGGGGACTTGCCGTAATGGTTTTGGTATACAGCCTTGGGCATGTCTCAGGTGCCCATTTCAATCCTGCAGTGACCATTGCCTTCTCTGCCTCTCGCAGATTCCCATGGAAACATGTGCCATCATATGTCGCATCTCAGGTGTTGGGTTCGACACTTGCAACCCTCACCCTAAAGGCGTTGTTCACAAACCAGTTCGTCGACAAGCAGTTCATAGGTGCAACGGTCACTGGGTTCTCGCGTCCAACTTATGACCTTGATGCTATCGCATGGGAATTCATCGTTTCGTTTATCTTGATGTTCGTCGTGTGCGGAGTGGCCACTGATCACCGGGCGATCCATGAGCTCTCTGGAGTTGCAGTAGGATCCACTGTGTTGTTTGACATCCTCGTTGCTGGGAAAACGACTGGTGCTTCCATGAACCCTGCGAGGAGTATAGGTCCTGCTCTTGTTTCTGGAGAATTTCACCAACTCTGGATTTATATTGTGGCTCCGATCCTCGGAACCACAGCAGCAACCATGATGTACAGCCTCCTTCGGGTGCCCATGCCCGATAAGGAGAGTACCAAGAGTGTATAA 888 0.4797 MAELPSPKTPIATELSDMEEGKTSPQGSLVNFESPTYTHKASPSYRRRRHHCCAVIMYYQNLNICFYVQIIAELVGTYILIFIGCGSILVDKKHNITIMGIAVAWGLAVMVLVYSLGHVSGAHFNPAVTIAFSASRRFPWKHVPSYVASQVLGSTLATLTLKALFTNQFVDKQFIGATVTGFSRPTYDLDAIAWEFIVSFILMFVVCGVATDHRAIHELSGVAVGSTVLFDILVAGKTTGASMNPARSIGPALVSGEFHQLWIYIVAPILGTTAATMMYSLLRVPMPDKESTKSV* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00691 295 MobiDBLite consensus disorder prediction 19 40 - -
Eupl03g00691 295 CDD MIP 68 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 PRINTS Major intrinsic protein family signature 105 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 PRINTS Major intrinsic protein family signature 68 87 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 PRINTS Major intrinsic protein family signature 142 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 Pfam Major intrinsic protein 66 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 ProSitePatterns MIP family signature. 123 131 IPR022357 -
Eupl03g00691 295 PANTHER AQUAPORIN NIP2-1 60 293 IPR034294 -
Eupl03g00691 295 NCBIfam MIP family channel protein 72 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Eupl03g00691 295 Gene3D Glycerol uptake facilitator protein. 44 292 IPR023271 -
Eupl03g00691 295 SUPERFAMILY Aquaporin-like 63 286 IPR023271 -
Eupl03g00691 295 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00691 Eupl-Chr3 26827380 26829297 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00691 64 294 Major Intrinsic Protein MIP AT5G37810 49.573 1.18e-74 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00691 K09874 - pvy:116123214 305.834