Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00686 ATGTTGGGGATGTCTGGTTTGTTGGGAAATTCCACCGGAAACCATGAAGGTGAGGTGGGTGTTTTTGGTGAAGAAGAGAGGGAGAGAGGTGAGGAGGGTGACCGGAATTTTACTGGGAATCGGTGGCCTCGTCAAGCAACGTTGGCTTTGTTAAACATACGGTCGGATATGGACGTTGCTTTCCGGGATTCAACTCTTAAAGGCCCACTATGGGAAGATGTTTCTAGGAAACTAGCAGAGCTTGGTTATCATCGAAGCGCCAAAAAATGCAAGGAGAAGTTCGAGAACGTCGACAAATACTACAAAAGAACCAAAGGAGGAAGATCTGCAAGACAAGACGGCAAAACCTACCGTTTTTTCGATCAATTAGAAGCTCTCCACAACCACCCCTCACATGATCCATCATCATCCCTACCTCTCATAAAACTTCATCAACCTCATCATCAAGATCCAACAATGGTGACACCAACAATCTCAACAAATAAAATCTCCCAACTCACTCTCCCATCATCTCTTCACAACCTCAGTACAGATTTCACATCCACCTCCATCTCTTTCTCGTCTTCCTCCGACGAAGAATCCGAAGATACTCGTAAAAAGAAGACAAAGATGGCGAATTTCTTCGACAGTCTAATGAAGGAGATGATTAAAAAGCAAGAGATCTTACAGAAGGAATTCTTAGAAGCTATAGAGAGACATGAACACCAACGTATGGTAAGAGAAGAAGCTTGGAAGATGCAAGAATTGGCTAGAGTGAATCGTGAACATGAAATTCTAGTCCAAGAACGATCTATCGCAGCGGCGAAGGATGCAGCTGTGATTGCTTTCTTGCAGAAGATCACTGAACAATCTAACCAAGTGCAATTGCAGGAAAACCCATCATCATCTGAGAAAATTGAAGAATACCTACAATCAAATAATGGTGTAAATTTTCTTCCAACAAGCTCTTCTCGATGGCCGAAATCAGAAGTTGAAGCTCTGATTAAGCTTCGAACAGGTCTCGACCTGAAGTATCAAGACATTAATGGGCCTAAAGGGCATCTATGGGAGGAGATATCGACGGCCATGAGAAGGCTTGGATACACTAGGAGCCCTAAGAGATGTAAAGAGAAATGGGAGAACATAAACAAGTACTTCAAGAAAGTTAAGGAGAGCAACAAGAGAAGGCCAGAAGATTCAAAGACATGCCCATATTTTCACCAACTCGACGCACTATACAAAGAGAAGACGAAGAAGATCGATAATTCATTCGCTCCTGCTTATGATTTGAAGCAAGAAGATCTTCTAGTACAAATGATAAGTAGTCGGCCGCCTGAATCCGTAATGGAAGATCTTGGTACTGACAATAATATCGAGCAGAATCATGAAGAAGATGGAGAAGATGAAGATGAAGATGAAGATGAACGAAGTGCTTATGAGATTGTAGCCCACAACACTTCTTCAATGACCTTTGTGGAGTGA 1461 0.4251 MLGMSGLLGNSTGNHEGEVGVFGEEERERGEEGDRNFTGNRWPRQATLALLNIRSDMDVAFRDSTLKGPLWEDVSRKLAELGYHRSAKKCKEKFENVDKYYKRTKGGRSARQDGKTYRFFDQLEALHNHPSHDPSSSLPLIKLHQPHHQDPTMVTPTISTNKISQLTLPSSLHNLSTDFTSTSISFSSSSDEESEDTRKKKTKMANFFDSLMKEMIKKQEILQKEFLEAIERHEHQRMVREEAWKMQELARVNREHEILVQERSIAAAKDAAVIAFLQKITEQSNQVQLQENPSSSEKIEEYLQSNNGVNFLPTSSSRWPKSEVEALIKLRTGLDLKYQDINGPKGHLWEEISTAMRRLGYTRSPKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYKEKTKKIDNSFAPAYDLKQEDLLVQMISSRPPESVMEDLGTDNNIEQNHEEDGEDEDEDEDERSAYEIVAHNTSSMTFVE* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00686 486 CDD GT1 40 105 - -
Eupl03g00686 486 Pfam Myb/SANT-like DNA-binding domain 40 126 IPR044822 -
Eupl03g00686 486 Pfam Myb/SANT-like DNA-binding domain 317 405 IPR044822 -
Eupl03g00686 486 MobiDBLite consensus disorder prediction 454 469 - -
Eupl03g00686 486 SMART sant 315 378 IPR001005 -
Eupl03g00686 486 SMART sant 38 100 IPR001005 -
Eupl03g00686 486 FunFam Trihelix transcription factor GT-2 42 103 - -
Eupl03g00686 486 MobiDBLite consensus disorder prediction 439 486 - -
Eupl03g00686 486 CDD GT1 317 383 - -
Eupl03g00686 486 MobiDBLite consensus disorder prediction 19 38 - -
Eupl03g00686 486 FunFam Trihelix transcription factor GT-2 319 381 - -
Eupl03g00686 486 Gene3D - 319 381 - -
Eupl03g00686 486 Gene3D - 42 103 - -
Eupl03g00686 486 ProSiteProfiles Myb-like domain profile. 317 376 IPR001005 -
Eupl03g00686 486 PANTHER FI21293P1 24 461 - -
Eupl03g00686 486 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00686 Eupl-Chr3 26728382 26731235 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00686 34 411 Trihelix Transcription Factor Family AT1G76880 50.873 4.01e-136 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Eupl03g00686 Myb_DNA-bind_4 3.2e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00686 - - nnu:104599891 552.362