Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00676 ATGGAACCCCAGTACACCGACACGCTCGCAGGGAATTACTTTTCCGGCCCAACCGACATAGACCAGATGCCGGAAACCCCACAACGAGGGTCACACCACAGGCGGACCCAATCGGAGAGCTTCTTGCGATTCCCTGACGAGATCCTCTTTGATGCCGATATTGATTTCAATCTCGCCGGCATTGATATCCCTTCGATGTCCGAAGACAACGATTCTCGCGGCAACGGTGGGTTCCCTATGACTGTCGATTCCGGCAAATCGGAGGAATCCAACGGTGATAAGGCAAAAGGGATATCGGCAGGAATGAGCCATTTCAGGAGCTTGTCAGTTGACGCTGACTTTTTTGAAGGGTTAGGGTTTCAACCGTTGACAGTTAGTGGTGGCGGGGAAGGGGAGAAATTTGGCGGGAAAGGGATTCCAGAGAAGAGAATGCATCGACATAGTAATTCGATGGATGGGTCATCGTCGTCGTTCGAAGTGGAGTCGATGGAAAGTGCAAAGAAGGCTATGGGACCGGATAGGCTGAAGGAGTTGGCTTTGATTGATCCAAAGAGAGCTAAAAGGATTCTTGCAAATAGACAATCTGCAGCTAGGTCAAAGGACAGGAAGATCCACTATACTAACGAGCTGGAAAGGAAGGTGCATACACTTCAGACAGAGGCTACCACCCTCTCGGCACAGGTCACAATGCTACAGGAGTTCGTGGGTTTGTTCCCAGCTCACCCACCAAAAATTGAGTACCATGAAAGAAAGAGAACTGAGGTCCTGTATTTCTTCCATATGATGCAGAGAGACACCACTGATTTGACTGTTGAGAACAAGGAACTCAGACTGCGGTTGCAGGCGATGGATCAACAAGCACATCTTCGAGAAGCTCTGAATGAAACGTTGAGGGAAGAAGTGCAGCGGCTTAAGATAGCTACTGGCCAAGTGCAATCTGTCAATGGAAACTCCTTTAACAGAGGACTGCCTCCATATTTCTCCCATTCGCAGCCCTTACGACATTTTAGCATTGCTCAGATCCAGCAGCAGCAGCAGCCCCACATGTCTCAGTCATCACCTAACAGTAATGGCCAGCCCCCGGGGGGGCAGCCACCTCAACATGGTAATCTAGACTTCCATCATAGGGTCTAA 1134 0.4982 MEPQYTDTLAGNYFSGPTDIDQMPETPQRGSHHRRTQSESFLRFPDEILFDADIDFNLAGIDIPSMSEDNDSRGNGGFPMTVDSGKSEESNGDKAKGISAGMSHFRSLSVDADFFEGLGFQPLTVSGGGEGEKFGGKGIPEKRMHRHSNSMDGSSSSFEVESMESAKKAMGPDRLKELALIDPKRAKRILANRQSAARSKDRKIHYTNELERKVHTLQTEATTLSAQVTMLQEFVGLFPAHPPKIEYHERKRTEVLYFFHMMQRDTTDLTVENKELRLRLQAMDQQAHLREALNETLREEVQRLKIATGQVQSVNGNSFNRGLPPYFSHSQPLRHFSIAQIQQQQQPHMSQSSPNSNGQPPGGQPPQHGNLDFHHRV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00676 377 Gene3D - 183 236 - -
Eupl03g00676 377 MobiDBLite consensus disorder prediction 136 156 - -
Eupl03g00676 377 MobiDBLite consensus disorder prediction 340 364 - -
Eupl03g00676 377 Coils Coil 207 227 - -
Eupl03g00676 377 CDD bZIP_plant_RF2 185 232 IPR044759 GO:0003700|GO:0006355
Eupl03g00676 377 FunFam probable transcription factor PosF21 183 235 - -
Eupl03g00676 377 MobiDBLite consensus disorder prediction 1 38 - -
Eupl03g00676 377 MobiDBLite consensus disorder prediction 66 94 - -
Eupl03g00676 377 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 23 364 - -
Eupl03g00676 377 MobiDBLite consensus disorder prediction 1 25 - -
Eupl03g00676 377 SMART brlzneu 180 244 IPR004827 GO:0003700|GO:0006355
Eupl03g00676 377 Pfam bZIP transcription factor 184 233 IPR004827 GO:0003700|GO:0006355
Eupl03g00676 377 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 182 233 IPR004827 GO:0003700|GO:0006355
Eupl03g00676 377 SUPERFAMILY Leucine zipper domain 184 235 IPR046347 GO:0003700|GO:0006355
Eupl03g00676 377 MobiDBLite consensus disorder prediction 340 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00676 Eupl-Chr3 26384758 26405202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00676 18 376 bZIP Transcription Factor Family AT1G43700 42.782 2.83e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl03g00676 bZIP_1 1.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00676 K20557 - nnu:104599870 451.055