Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00674 ATGGAAACCTCCTCTTCTCCTCAGGTTCAGTATTTAAGCATGGATCCTCTGCTTAAATTCTCGTGTTGTGCAGATAGAAACCAGTCGATACCCATCTCACGATTTCAGTTTTCAATCTTTGCGGAGAATCTAATGGGCCTTACCGAGCCAATCTACGTCGAAGAACTCCATGAATGTAGCTTGGAAACTCCATTTTCTTTCCAAACAGAGGAACCCATCTTCCCAAATTCTATCCAAGAAGGTGTTTTCGATGATGGGTTCATGGAAAGATTACTACAAATGGAGACAGATCTCAATGCTGTAAACCCGGATACTATTGTTTTCGAAGTTGATTCTCTCATGGACTTCGATTCAATTCATCAAGAAAACCAAGAGAATGTGGTTTCGACGTCGAAGGAGAATTCCCATTTGAAGGAAATTCAGGAGGAGCTGATGGAGGAGAACAGCATAATTGATCTCCTACTGAGAGGAGCTGAAGCTGCTGAAGAGGAGAACTGGCCTCTCGTTTCGACTGTGACTGGGAGGATCAACAGTCTCCTTTACAATAAAGAAAATGGGGACGAACCCTTTGATAGATTGGCCTCCTTCTTCACTCAAGGCCTACAACATAAGAGCATCAATGCTCCCGATCAACAGTTAACTGAACCTGTTCGTAAACAAACAGACACCATGTCTGCCTTTCAGATGCTCCATGAACTCTCGCCCTACGTGAAGTTCGCGCACTTCACTGCCAACCAAGCAATCCTCGAGGCCACCCAAGGGAAGCAGGAGGTTCACGTCATCGATTTCGATGTAATGGAAGGGATCCAATGGCCACCGTTGATGGTCGATCTAGCACTGAGGAAGGAAGCTGCTTTGAGGATAACCGCAATTGTCGGTTACCGACAAAATGCAGGTCTCATCCAACAGACGGGGAGAAGACTGAAGGAGTTTGCTGATTCAATCAACCTTCCATTCAGGTTTGATCAGATGGTGATGGAGAAAGAAGAGGATTTTAAAGGAATTGAAGTGGGTCAGACACTGATAGCCAACTGTATGATATTCCACCAGCTCCACATGCCTAACAGGAAATTCTCATCGGTTAAGTCTTTCTTGGGTGGTGTTAGCAAATTATCCCCGAAGATGATTGTTTTAGTAGAAGAAGAGCTGTTTAATTTTTCTAAAACTCCATCTATGTCCTTTGTAGAGTTCTTCTGTGAAGCTCTCCACCATTATACTGCACTGCATGATTCACTAATGAGTAGTTTTTGTGGGGAGTATAAGGTAGGGCTGAAGGTGATTGAAGAGTTCTTGAGGCTTAGGATCATGGACTGCGTGAAGCAGTTTCCAGGTGAGAAGAATGAGAGGAAGATTTGGGGAGATGGGTTTTCTTCCTTGAAGGGATATAAAGCCATCCCAATGAGTTTTTGTAATGTTTCCCAAGCCAAGTTCTTGGTGGGTCTGTTTAGTTTGGGATATTGGGTGCAACATGAGAAGTGCAGGTTGGCTTTGTGTTGGAAATCAAGGCCTTTGACAACAGCTTCAATTTGGGTCCCCATATCAAACTCAAGGTGA 1554 0.4408 METSSSPQVQYLSMDPLLKFSCCADRNQSIPISRFQFSIFAENLMGLTEPIYVEELHECSLETPFSFQTEEPIFPNSIQEGVFDDGFMERLLQMETDLNAVNPDTIVFEVDSLMDFDSIHQENQENVVSTSKENSHLKEIQEELMEENSIIDLLLRGAEAAEEENWPLVSTVTGRINSLLYNKENGDEPFDRLASFFTQGLQHKSINAPDQQLTEPVRKQTDTMSAFQMLHELSPYVKFAHFTANQAILEATQGKQEVHVIDFDVMEGIQWPPLMVDLALRKEAALRITAIVGYRQNAGLIQQTGRRLKEFADSINLPFRFDQMVMEKEEDFKGIEVGQTLIANCMIFHQLHMPNRKFSSVKSFLGGVSKLSPKMIVLVEEELFNFSKTPSMSFVEFFCEALHHYTALHDSLMSSFCGEYKVGLKVIEEFLRLRIMDCVKQFPGEKNERKIWGDGFSSLKGYKAIPMSFCNVSQAKFLVGLFSLGYWVQHEKCRLALCWKSRPLTTASIWVPISNSR* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00674 517 ProSiteProfiles GRAS family profile. 141 511 IPR005202 -
Eupl03g00674 517 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 142 506 IPR005202 -
Eupl03g00674 517 Pfam GRAS domain family 151 510 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00674 Eupl-Chr3 26339632 26341185 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00674 139 510 GRAS Transcription Factor Family AT5G41920 31.105 8.27e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl03g00674 GRAS 7.4e-73 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00674 - - vvi:100248787 588.571