LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl03g00673	ATGGGCCTTGAGAAGGTCCCTGACACTGAGTTGGGTTCTGAGATGAATCAAGAAAACCAAGAGAATGTAGTTTCGACTGCGGCGAAAGAGAATTCCCATTTGAAGGAAATTCAGGAGGAGCTGATGGAGGAGAACAGCATAATAGATCTCCTATTAAGAGGAACTGAAGCTGTCGAAGACGAGAATTGGCCTCTCGTTTCAACTGTGACTGAGAGGATCAACAGTCTCCTATACGATAAAGAAAATGGGGACGGCCCATTTGATAGATTGGCTTCCTTCGTCACTCAAGGCCTACAATATAAGAGCATCAATGCTCCTAAACAGTTATATGAACCTGTTCGTAAACGAACAGATACCATGTCTGCCTTTCAGATGCTCCATGAGCTCTCCCCCTACGTGAAGTTCGTGCACTTCACTGCTAACCAAGCGAACATCGAGGCCACCCAAAAGGAGCAGGAGGTTCACGTCATCGATTTCGAGGTAATGGAAGGGATCCAATGGCCACCATTGTTGGTCGATCTAGCACTGAGGAAGGAAGCTTCTTTGAGGATAACCGCAATTGTCAGTTCCCCACAAAATGCAGGTCTTATTCGACAGACAGGGAGAAGACTGAAGGAGTTTGCGGATTCAATCAACCTTCCATTCAGGTTTGATCAGATGGTGATGGAGAAAGAAGATCTGATTTTAAAGGAATTGAAGTGGGTCAGACACTGA	714	0.4566	MGLEKVPDTELGSEMNQENQENVVSTAAKENSHLKEIQEELMEENSIIDLLLRGTEAVEDENWPLVSTVTERINSLLYDKENGDGPFDRLASFVTQGLQYKSINAPKQLYEPVRKRTDTMSAFQMLHELSPYVKFVHFTANQANIEATQKEQEVHVIDFEVMEGIQWPPLLVDLALRKEASLRITAIVSSPQNAGLIRQTGRRLKEFADSINLPFRFDQMVMEKEDLILKELKWVRH*	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl03g00673	237	ProSiteProfiles	GRAS family profile.	38	237	IPR005202	-
	Eupl03g00673	237	MobiDBLite	consensus disorder prediction	1	23	-	-
	Eupl03g00673	237	Pfam	GRAS domain family	48	235	IPR005202	-
	Eupl03g00673	237	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	40	225	IPR005202	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl03g00673	Eupl-Chr3	26330802	26331515	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl03g00673	36	217	GRAS Transcription Factor Family	AT5G41920	37.563	4.14e-27	105

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Eupl03g00673		GRAS	1.3e-41	CL0063

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl03g00673	-		-	aew:130780640	265.388