Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00672 ATGGAGTTGATTGAAGGAGTTGGCGAGAGTTCGTCGCCGATGCGGAGCTGTTTTGGGGGTTTCGGTGGGTATGATATAAGGAACGATGTCTATAACCGGTTGGTGGAGAGCGGGAATGAGGAGGCAGTGTGTAATCCGGAATTTCGTGATCAGTTGGATGCTCACTTTAATCGGTTGCCCTCTAGTTATGGATTAGACGTGAATATGGATAGGGTGGAGGACGTTTTGTTACATCAAAAGCTTCTTGCTTTAGCAAAGGATCCAGACAAGCGACCTGTTTTCCATGTCCGTTTCATGGAGAGTATTAGGACTAGAATGGATGGAAATGATGATCTACAACAACCAATAATAGTTCCTTCAAAGGCATGCTGTAATGCAGAACGTGAAGGAATTGTACCATCAAATAACGGCACTTCTACAAGTAGAAATAGAGATAGTGAGATTGACTTTGAACCTTGCTCAAAGCTTGAGGACTTAAATTTGGATGTTGGAAAGAATGCTGACGATACCGAGGGAAGATATCTCATGGATAATTTTTCAGGAAGGCAGGAAGTTTCACATGTTCCAGTACATGAAATTATATTTTCTACCATCGACAAGCCCAAGCTTCTTAGCCAGCTCTCTGCTTTACTTTCTGACATCGGGCTAAACATCCGTGAAGCACATGTGTTCTCGACAACTGATGGCTACTCTTTGGACGTGTTTGTGGTGGATGGGTGGCCTGTTGAGGACACAGATGGTTTGCACGAAGCAGTGGAGAAAGCAGTTGCAAGATGCGAGGGGTCATGGTCTGGTTCTTCCCCTTCTCATTCAGCCATAGAGAAGGCATTAGCGACGCAACCAAACCCTGGCGATTGGGAAATCGATAGAAGATTGTTGAAGATAGGAGAAAAAATTGCATCTGGATCTTGTGGAGATTTGTATCATGGAGTTTACCTAGGGCAAGATGTTGCTGTTAAAGTCATTAGACTTGAGCATTTAAATGAAGCTTTGGAGGTAGAATTTGCTCAAGAAGTAACGATCCTAAGGGAGGTTCAACATAGGAATGTTGTTCGTTTTATTGGTGCATGCACAAAACTTCCACAGTTGTGCATTGTAACAGAGTATATGCCTGGAGGAAGTCTCTATGATTTTTTGCATAAGCATCATAATTTCTTGGAACTCTCTCTGTTGCTGAAGTTTGCAATGGATGTCTGCAAAGGAATGGAATATTTGCACCAAAACAACATAATACATAGGGATCTGAAGACAGCAAATCTGCTGATGAATACTGACAATGTTGTAAAGGTGGCAGATTTTGGTGTAGCGCGGTTCCAAAGTCAAGGGGGAGTAATGACAGCGGAAACTGGAACTTACAGATGGATGGCACCTGAGGTTATAAATCACCAACCATATGATCAGAAAGCAGATGTGTTCAGTTTTGCTATAGTACTGTGGGAGCTCACAACAGCCAAGGTCCCATATGATAACCTGACCCCTTTACAAGCTGCCCTAGGAGTTCGACAGGGGCTGAGACCTGATCTTCCCGAGAATGCACACCCCAGGCTGTTGGACTTGATGCAGAGATGTTGGGAAGCGGATCCTAGTAATCGGCCTTCCTTCTCAGAGATAACCGTTGAACTTGAAGAACTCTTCCAAGAGGCTGAGGCTCAGGCAACTTCAGAGGTTTCAAACCATTGCCGATGA 1686 0.4407 MELIEGVGESSSPMRSCFGGFGGYDIRNDVYNRLVESGNEEAVCNPEFRDQLDAHFNRLPSSYGLDVNMDRVEDVLLHQKLLALAKDPDKRPVFHVRFMESIRTRMDGNDDLQQPIIVPSKACCNAEREGIVPSNNGTSTSRNRDSEIDFEPCSKLEDLNLDVGKNADDTEGRYLMDNFSGRQEVSHVPVHEIIFSTIDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEDTDGLHEAVEKAVARCEGSWSGSSPSHSAIEKALATQPNPGDWEIDRRLLKIGEKIASGSCGDLYHGVYLGQDVAVKVIRLEHLNEALEVEFAQEVTILREVQHRNVVRFIGACTKLPQLCIVTEYMPGGSLYDFLHKHHNFLELSLLLKFAMDVCKGMEYLHQNNIIHRDLKTANLLMNTDNVVKVADFGVARFQSQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFAIVLWELTTAKVPYDNLTPLQAALGVRQGLRPDLPENAHPRLLDLMQRCWEADPSNRPSFSEITVELEELFQEAEAQATSEVSNHCR* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00672 561 FunFam Serine/threonine-protein kinase isoform 1 283 371 - -
Eupl03g00672 561 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 189 549 - -
Eupl03g00672 561 Pfam Protein tyrosine and serine/threonine kinase 293 540 IPR001245 GO:0004672|GO:0006468
Eupl03g00672 561 Gene3D Phosphorylase Kinase; domain 1 283 370 - -
Eupl03g00672 561 ProSiteProfiles ACT domain profile. 192 266 IPR002912 -
Eupl03g00672 561 ProSiteProfiles Protein kinase domain profile. 293 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00672 561 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672|GO:0006468
Eupl03g00672 561 PRINTS Tyrosine kinase catalytic domain signature 512 534 IPR001245 GO:0004672|GO:0006468
Eupl03g00672 561 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672|GO:0006468
Eupl03g00672 561 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672|GO:0006468
Eupl03g00672 561 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672|GO:0006468
Eupl03g00672 561 SUPERFAMILY ACT-like 191 258 IPR045865 -
Eupl03g00672 561 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672|GO:0006468
Eupl03g00672 561 SUPERFAMILY Protein kinase-like (PK-like) 273 545 IPR011009 -
Eupl03g00672 561 Gene3D Transferase(Phosphotransferase) domain 1 371 560 - -
Eupl03g00672 561 SMART serkin_6 293 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00672 561 CDD STKc_MAP3K-like 299 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00672 Eupl-Chr3 26257237 26303272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00672 25 547 MAP Kinase Kinase Kinase AT2G17700 50.841 1.65e-178 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl03g00672 PK_Tyr_Ser-Thr 7.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00672 - - msin:131234800 897.116