Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00662 ATGGCTTCTATACTTGATCTATTCTTTCTACTTTTGTCTGTTCTCTCCGTAGTTGTAGGAGGAGCTCAACAAAAAAACTCCCATTTGATAACCTTAGGCTCGTCACTCTCCCCCACCACTCAACCCACTTCATGGTTCTCACCTTCTCGCCAATTCGCTTTCGGGTTCTACCCACAAGGCAGTGGGTTTGCTATCGGAATTTGGTTGGTGGGCAGTCCTGAAAACACCGTCGTGTGGACGGCAAATCAAGACAACCCACCGGTCTCGTCGAACGCCACATTGGAGTTGACTAAGGATGGTAAGCTCCTTGTACGAACCCAACAAGGTGATGAAAAGAAACACATTACTGATTCCTCAATTTCGGCTTCCTTCGCTTCCATGCTCGATTCTGGCAACTTTGTGCTCTATAACAACAATTTCCATACCATATGGGAGAGCTTCCGATTTCCTACTAACACCATACTAGGAGGTCAGAAACTACTGACGGAGGGAAACGAAGTGACTCTAAATCTCAATCAAAGAGGCCATTCGTGGCTCCGAAATAGCAGTACTGGTGACGACATATATACTGTGGCCTACACCGCATCTTCCTATAGGAGCGAGAGCACTGTCTACCGTGCAACACTTGATGCTGATGGGATTTTTCGGTTGTACTCCCACAGCTTTGGCACCGACAGTAGATCCATTGTGTTGATCGAAAGGTCGGCGTATGACCAGTGTGAAGTCAAAGGTTTCTGCGGCTCCAATAGCTTCTGCACGTTCATGGACAATGAAGCCATTTGCATTTGCCTTCCTAGTTTCGATTTCGTCGACTCCAATCACAAGTCCCGTGGCTGTAAAAGGAACTTCACAGAACAAGGTTGCAGAGGCAGTAAAGACAACACAAGCTTGTACAACATTATTGCTATGGAGAACATGAACTTGGACAATTCTTACTTTCAAGAATCAATGACAAAAGAAGGTTGCAGCAAGTCATGTTTGGACGATTGTAATTGTGTTGCTGCCCTTTATGACACTGATGGGACATGCAAGAAGCAAAACCTTCCACTGAAACAAGCGAGAAGAGATCTTAATAAGTTGAACACGATTTTCTTCAAGGTGAGTTCAACAACGATCAAGAGCACAAACGACACCACGCTACCCACCCCATTAATGAAGCGGAAAGTTGTTACTGAAAGCAAGAAAGAAATTGTTATAATTCTAGTTGTAAGTTTAAGTTTTGTTGCATGCTCTTTTGTTGCCATTGCAATCTCTGGTTTGATTATTTACAGAGACGGAGTTCTGAGGTATAGAAAGGTGTTGGAGAATGAGAATCTGGGTCTCACAGAGGAGTTTACACTGCGATTGTTCTCTTACAACGAGCTTGAGAAAGCAACTGACGGATTTAAGGAAAAGTTGGGTGGGGGATCTTTCAGAGCAGTTTATAAAGGGGCCCTACCGAAGGGTAACAAAATTGTTGCAGTAAAGAGACTAGAGAAAATAGTGGAAGAAGGGGAAAGGGAATTTCGTGCCGAAATGAGAGCAATAGGAAGAACCCATCACAGGAACTCGGTTCGATTGCTTGGCTACTGTGCTGAGGGCTCCAAGAGGCTTCTGGTTTATGAGTATATGACCAATGGCTCACTTGCAGACCTTCTCTTCAAGGTCGAAAATCGCCTGGGATGGAACGAAAGAGTGAGAATCGCATTGGATGTAGCTAGAGGAATCCTCTATCTACATGAAGAATGCGAAACCCATATCATCCATTGTGATATAAAGCCTCAAAACATATTGATGGATGATTTTTGGATTGTTAAGGTCTCTGATTTCGGGTTGGCAAAGCTGTTAATGCCAAATCAGACAAGAACCTTTACTGGGGCCAGAGGAACGAGAGGATACTTGGCACCGGAATGGCAGAAGAACACCCCAATCTCGGTTAAGGCTGATATCTACAGCTTTGGGGTTGTATTGTTGGAGATTGTATGCTGTAGAAGGAACATAGAGGTTACTGTAGCAGCAACAGATGAGATTGTTCTTTCTAGTTGGGTTTATAAATGCTTGGTAGCGAGAGAGTTGAATAAGCTTGTGGCTGGTGAAGAGGTAGACATGAAGACACTAGAGAGGATGGTTACGGTTGGATTGTGGTGTATTCAAGATGAACCTGCTCTTCGTCCTTCCATGAAGAATGTGATCTTGATGTTAGAGGGAATTATGGAAATAGTAGTCCCTCCATCTCCAACTTCTTCCTTCATGATTTCTTGA 2241 0.44 MASILDLFFLLLSVLSVVVGGAQQKNSHLITLGSSLSPTTQPTSWFSPSRQFAFGFYPQGSGFAIGIWLVGSPENTVVWTANQDNPPVSSNATLELTKDGKLLVRTQQGDEKKHITDSSISASFASMLDSGNFVLYNNNFHTIWESFRFPTNTILGGQKLLTEGNEVTLNLNQRGHSWLRNSSTGDDIYTVAYTASSYRSESTVYRATLDADGIFRLYSHSFGTDSRSIVLIERSAYDQCEVKGFCGSNSFCTFMDNEAICICLPSFDFVDSNHKSRGCKRNFTEQGCRGSKDNTSLYNIIAMENMNLDNSYFQESMTKEGCSKSCLDDCNCVAALYDTDGTCKKQNLPLKQARRDLNKLNTIFFKVSSTTIKSTNDTTLPTPLMKRKVVTESKKEIVIILVVSLSFVACSFVAIAISGLIIYRDGVLRYRKVLENENLGLTEEFTLRLFSYNELEKATDGFKEKLGGGSFRAVYKGALPKGNKIVAVKRLEKIVEEGEREFRAEMRAIGRTHHRNSVRLLGYCAEGSKRLLVYEYMTNGSLADLLFKVENRLGWNERVRIALDVARGILYLHEECETHIIHCDIKPQNILMDDFWIVKVSDFGLAKLLMPNQTRTFTGARGTRGYLAPEWQKNTPISVKADIYSFGVVLLEIVCCRRNIEVTVAATDEIVLSSWVYKCLVARELNKLVAGEEVDMKTLERMVTVGLWCIQDEPALRPSMKNVILMLEGIMEIVVPPSPTSSFMIS* 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00662 746 SMART serkin_6 460 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00662 746 ProSiteProfiles Bulb-type lectin domain profile. 27 148 IPR001480 -
Eupl03g00662 746 PIRSF SRK 1 205 IPR024171 GO:0004674
Eupl03g00662 746 PIRSF SRK 177 746 IPR024171 GO:0004674
Eupl03g00662 746 Pfam D-mannose binding lectin 76 178 IPR001480 -
Eupl03g00662 746 Gene3D - 24 147 IPR036426 -
Eupl03g00662 746 FunFam S-receptor-like serine/threonine-protein kinase 430 536 - -
Eupl03g00662 746 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 36 738 - -
Eupl03g00662 746 ProSiteProfiles Protein kinase domain profile. 460 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00662 746 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 220 IPR036426 -
Eupl03g00662 746 Pfam Protein kinase domain 463 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00662 746 Gene3D Phosphorylase Kinase; domain 1 428 536 - -
Eupl03g00662 746 Gene3D Transferase(Phosphotransferase) domain 1 537 735 - -
Eupl03g00662 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 580 592 IPR008271 GO:0004672|GO:0006468
Eupl03g00662 746 SMART blect_4 27 150 IPR001480 -
Eupl03g00662 746 SUPERFAMILY Protein kinase-like (PK-like) 443 728 IPR011009 -
Eupl03g00662 746 Coils Coil 682 702 - -
Eupl03g00662 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 537 735 - -
Eupl03g00662 746 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 23 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00662 Eupl-Chr3 26018220 26020607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00662 405 732 Receptor kinase-like Gene Family AT5G45780 39.823 4.44e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Eupl03g00662 Pkinase 3.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00662 - - vvi:100262539 866.3