LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl03g00655	ATGCCTTCTTGTTCTTTGCTGTTGTTATGGCCTTTGGTCTTCTTCATCTTGCTTCCACCCTCCCTTTCTCTCCCTTTCCCCTCTGAAGAAAACATCACCCTCCTTGGAGATGCTTATTATAGGAATGGCGCCATTAGCCTCACCCAAGAACTCGGCAGCATTGCTTCTTCTATTGGGGTCGGAAGAGCTCTCTACACTTACCCAATTCGCTTTCTTGATCCTAAAACTAATTCTACCGCCTCCTTCTCCTCTCGCTTCTCCTTCTGTATCACCCCTTCTCCTTCTTTTCCTTTCGGAGATGGTCTTACCTTCTTGATCACCTCCAATTCACGTAAAATTAGCAGCTCTGTTGGCTACATGGGTCTCCCTGATCACACCAATAACATCCAAGAATCGTTCATTGCAGTCGAATTCGATACTAGTTTCGACCCATCTCTTGGAGATATCAACGACAACCATATCGGTCTCGACGTCAACACAGTTGTTTCTTTTGATTCAATTGATGCTGGTTCAACAGGAATAGATCTCAAGAGTGGAACGCGCACGACGGTTTGGATCGAATACAACGATTTCAAGAAGATGATCAGGGTTTGGGTCAGCTTATCAAAATTCAGGCCTCCTGCTCCCTTTCTTGCTACCCACATTGACCTCTCAATTCATTTTAGAGAGTTCATGCACGTCGGATTCTCTGCTTCTAATGGAAATGGCGCAGCGCTTCACCTCGTCGAGAGGTGGCGATTCATGACGTTCGGGTTGCTACCTTCAGAGATGGCTACTAATACAGGGCAAGGAGACGACTGTTTGATGTGTTTTCCCGATGATTTGGATGTTGAAATTGGGTCCTTCAATCTCCACCCCAAAAAAATTAAGATTGGAGAGTTGGGTCTTGGCTTGATTGGAGGAGGAGCATTTGTTCTCTCCATGGTAGTGATCATTGGTGGCATTAGTTGGTATCTGGTTATGGTGAGGAAGAGGAGAATTGACAGCGGAGAAACTGAAACTAGCCAAATTTGCAGAACTCAACTAAAGAAAGTACCCACAAGGCTATCACTTGCTGAGATAAAATCGGCGACAAGGGGATTCCATCGGAATAGAATTATCGGTGAAGGTGCATCAGGGACTGTCTATGAAGGGTTCCTCAACTCTGGCAGGGAAGTGGCTATCAAAAGATTCAGACAGATCGATCAGGTCGATCGCTTTATAGACCCCTTCAAGAATGAGCTAGAGGCCATGGTGGGCTGCTTAAAACACAAGAATTTAGTTCAGCTCCAAGGCTGGTGCTGTGAAGGAGATGAATTAATCCTGGTTTATGAGTACATGCCTCATGGAAGCCTTGACAAGATCCTCCACAAGACCACCAATTCACCAAGAATCCTCAAATGGGAAGATAGACTGAAAGTAGTCCTTGGTGTCGCATCGGCACTCACTTATCTGCATGAAGAGTGTGAGAGACAGATCATTCATAGAGATGTCAAGGCATGTAACATACTACTTGATGCTGAATTCAATGCCAAGCTTGGAGATTTTGGTTTGGCAGAGCTTTACGAACGAAGTAGTACTACACGGGAAGCAACCATACCAGCAGGAACCATGGGATATCTTGCACCTGAATATGTACATTCAGGTGTACCCACTGAGAAGACTGATGTGTACAGCTTCGGCGTTGTGGTGTTAGAGGTGGCGACGGGAAAGCGACCAGTAGGTAACGAGGGAATTGTGCTCGTGGATTGGGCATGGGATATGTGGGCTAAGGGAAAATTGATGGAGGCTGTTGATTATAAATTGATGGGGAGATTTGATAGGAAGAAGATGGAAGGAATGCTAATGGTGGGACTCTCTTGTGTGCACCCCAACTGTATGGAGAGGCCGACGGTTAAGGAGGCGATAAGGATGCTTAGAGAAGAAATACCGCTCCCCGTCTTACCGACAAGTAAACCTGTGATAAGAATTCTCTCTCATCTGCCTGAAGGTTCTGAAGAAATACTGAATGGAGATGGAGATGGGAATCATGGATCTCATGGCACGCCATGGTCAACCCCTCTTAGCCATTTCAACTAA	2058	0.4582	MPSCSLLLLWPLVFFILLPPSLSLPFPSEENITLLGDAYYRNGAISLTQELGSIASSIGVGRALYTYPIRFLDPKTNSTASFSSRFSFCITPSPSFPFGDGLTFLITSNSRKISSSVGYMGLPDHTNNIQESFIAVEFDTSFDPSLGDINDNHIGLDVNTVVSFDSIDAGSTGIDLKSGTRTTVWIEYNDFKKMIRVWVSLSKFRPPAPFLATHIDLSIHFREFMHVGFSASNGNGAALHLVERWRFMTFGLLPSEMATNTGQGDDCLMCFPDDLDVEIGSFNLHPKKIKIGELGLGLIGGGAFVLSMVVIIGGISWYLVMVRKRRIDSGETETSQICRTQLKKVPTRLSLAEIKSATRGFHRNRIIGEGASGTVYEGFLNSGREVAIKRFRQIDQVDRFIDPFKNELEAMVGCLKHKNLVQLQGWCCEGDELILVYEYMPHGSLDKILHKTTNSPRILKWEDRLKVVLGVASALTYLHEECERQIIHRDVKACNILLDAEFNAKLGDFGLAELYERSSTTREATIPAGTMGYLAPEYVHSGVPTEKTDVYSFGVVVLEVATGKRPVGNEGIVLVDWAWDMWAKGKLMEAVDYKLMGRFDRKKMEGMLMVGLSCVHPNCMERPTVKEAIRMLREEIPLPVLPTSKPVIRILSHLPEGSEEILNGDGDGNHGSHGTPWSTPLSHFN*	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl03g00655	685	FunFam	L-type lectin-domain containing receptor kinase VIII.1	440	650	-	-
	Eupl03g00655	685	ProSiteProfiles	Protein kinase domain profile.	361	641	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl03g00655	685	SUPERFAMILY	Concanavalin A-like lectins/glucanases	26	249	IPR013320	-
	Eupl03g00655	685	CDD	lectin_legume_LecRK_Arcelin_ConA	27	251	IPR001220	GO:0030246
	Eupl03g00655	685	Gene3D	-	22	259	-	-
	Eupl03g00655	685	MobiDBLite	consensus disorder prediction	659	685	-	-
	Eupl03g00655	685	CDD	STKc_IRAK	367	632	-	-
	Eupl03g00655	685	PANTHER	-	48	636	-	-
	Eupl03g00655	685	Gene3D	Phosphorylase Kinase; domain 1	321	439	-	-
	Eupl03g00655	685	Pfam	Protein kinase domain	361	630	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl03g00655	685	ProSitePatterns	Protein kinases ATP-binding region signature.	367	389	IPR017441	GO:0005524
	Eupl03g00655	685	Gene3D	Transferase(Phosphotransferase) domain 1	440	637	-	-
	Eupl03g00655	685	Pfam	Legume lectin domain	26	249	IPR001220	GO:0030246
	Eupl03g00655	685	FunFam	L-type lectin-domain containing receptor kinase S.6	325	439	-	-
	Eupl03g00655	685	SMART	serkin_6	361	632	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl03g00655	685	ProSitePatterns	Legume lectins beta-chain signature.	134	140	IPR019825	-
	Eupl03g00655	685	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	486	498	IPR008271	GO:0004672\|GO:0006468
	Eupl03g00655	685	SUPERFAMILY	Protein kinase-like (PK-like)	341	632	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl03g00655	Eupl-Chr3	25818868	25821374	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl03g00655	5	685	Receptor kinase-like Gene Family	AT5G42120	50.980	0.0	650

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Eupl03g00655		Pkinase	2.9e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl03g00655	-		-	nnu:104590348	850.506