Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00651 ATGGAGATGAAGCAAGGACCAACAGTAACAAAAGCCGATAGCCTAGAGAATTTTGATGTCACAAGTGAAGCTATTTTCATGCCGAAGACATCGCAGGACTTCATTTTTGTTCCTGCTAGGAAATCTAGCAGTAAATCCTCGAGTGTGATTGACGAACCTGAGGTCCGAAGCAGCTTAGGGAGGAGGAAGAGCCTTGGAAGGAAAATGGAATCACCAAGTAAAAGAACTATCCGGAAAGCTAAGTCATTAAGTGCCCAATTCCTAGTTGACATAGATGAACTGATTAGCAATGCAGCTGGAAGCTTTAGTGAGTCAGGTCCTGTGCTTAGTAGAGCTTCTAGCAATAACCTGGGCTTCTCCTTCTCACTTGCCGGAGCCACCATGGCCCCCGACGAAATATCGGATGTGTTGAGATTAAAAAACCCAAATTGCGAAGACAGTTCAATGTGTGAATCACCAGTAGCTTCTGAGGAGGATCCAGAATCATTCAACTGGAAGAAAATACAGATTGAGCCTACTTTCCCCATATTTCTCAAGTTCCAAGATGTAAAATACAAGGTATCTGTGAAAGGAGGAAAGGGTTCAGAGGCTGAGAAGTACATACTTCACGGAATTACTGGTTTGGTACACCCCGGAGAGGTTCTGGCACTTATGGGACCATCAGGAGGTGGTAAAACAACTTTACTGAATCTCCTCAGTGGAAGAGTGAAAAATAATGACCTCAATGGTAGCATCACTTACAATGACCAACCATATTCCAAGTCACTAAAGCGAAGGATTGGTTTCGTGCTGCAAGATGATGTTGTGTTTCCTCACCTCACAGTAAAAGAGACACTAACATATGCCGCTCTTCTTCGTCTTCCCAAGATGTTAACCAGGCACCAGAAAGAAGAAAGAGCTATGAATGTTATCGTTGAACTCGGCCTCGAAAGGTGCCAAAATACAATAATTGGAGGGGGATTTGTGAGAGGGATATCTGGTGGTGAAAGAAAAAGAGTCTGCATCGGGAGTGAAATCCTGCTCAACCCATCACTTCTGTTCCTAGACGAACCGACATCTGGTCTGGATTCGACAACTGCACTTCGAATTGTCCAGATGCTACGCAAAATTGCAGAGGCTGGCAAGACAGTTGTCACTACAATACATCAGCCTTCAAGCAGACTGTTCAATACGTTCGACAAGTTAATTCTCTTGGGTAAAGGCAGTTCCTTGTACTTTGGAAAAGCCTCAGAAGCAATGCTGTATTTCTCCTCAATTGGTTGCTCTCCTCTGATATCCATGAACCCAGCTGAATTTCTCATTGATCTTGCAAATGGGAATATAAATGATAAATCAATTCCATCAGAATTGGAGGATAAAGTCTTACTTGGAAGCCACAAATTCGAAATCCAAGATGGAAGGCCATCTTCTGTCCATGTCCATGAGTATCTTGTAGGGGCTTATGAAACAAGGGTTGCACACCTAGAGAAGAAGAAGCTTACAAACCCTGTGCCGACTGAGGGTGATCCGGAGATGCAGGGTAGATTGAATTCAAGGGAGTGGGGAGCAACTTGGTGGGAACAATACTCAATTCTTTTCAGGAGAGGCCTGAAAGAGAGACGCCATGAATATTTAAGCTGTGTACGAGTGACTCAAGTTATATCAACTGCAATCATATTAGGATTGCTCTGGTGGCACTCTGATGCTTCATCTCCTAAAAGGCTACATGATCAGGCAGGGCTGTTGTTCTTCATTTCAGTATTCTGGGGTTTCTTTCCTGTATTTACAGCCATCTTCACATTCCCGCAAGAAAGAGCGATGCTGGCCAAAGAGCGATCGGTGGACATGTACAAGCTCAGTGCATACTTCATGGCCAGAAACACTAGTGATCTTCCTTTGGATCTCATCCTTCCTATAGTGTTCCTAGTAATAGTCTATTTCATGGTGGGCTTGAAGCAGAGCTCTTCCACATTTTTTCTAACCATGTTAACTGTTTTCCTCAGCATTGTATCTGCTCAGGGTTTGGGACTGGCCATAGGTGCAGCATTTATGGATGTGAAGAAAGCAACAACACTGGGTTCTGTTATTGTTATGACATTCATGTTATCTGGTGGATTCTTTGTACAGAAGGTTCCGCCTTTCATGTTGTGGGTACGCTACATCTCATTCAATTACCACACCTACAGACTTCTCCTCAAGATCCAGTACAGTTGCTCAAGTGCGGGTTCCGGGTCGGTTTCATGCAAGTCTCCCTTCATTAAAGGACTTAGACTCGATGATGGTGGAAAGGAAGCGGCTGCCATGATTGCAATGGTTTTTGGGTACCGGTTATTGGCCTATTTCTTCCTACGGAGAATGAAACTTAGGACAGCTACATAG 2358 0.4398 MEMKQGPTVTKADSLENFDVTSEAIFMPKTSQDFIFVPARKSSSKSSSVIDEPEVRSSLGRRKSLGRKMESPSKRTIRKAKSLSAQFLVDIDELISNAAGSFSESGPVLSRASSNNLGFSFSLAGATMAPDEISDVLRLKNPNCEDSSMCESPVASEEDPESFNWKKIQIEPTFPIFLKFQDVKYKVSVKGGKGSEAEKYILHGITGLVHPGEVLALMGPSGGGKTTLLNLLSGRVKNNDLNGSITYNDQPYSKSLKRRIGFVLQDDVVFPHLTVKETLTYAALLRLPKMLTRHQKEERAMNVIVELGLERCQNTIIGGGFVRGISGGERKRVCIGSEILLNPSLLFLDEPTSGLDSTTALRIVQMLRKIAEAGKTVVTTIHQPSSRLFNTFDKLILLGKGSSLYFGKASEAMLYFSSIGCSPLISMNPAEFLIDLANGNINDKSIPSELEDKVLLGSHKFEIQDGRPSSVHVHEYLVGAYETRVAHLEKKKLTNPVPTEGDPEMQGRLNSREWGATWWEQYSILFRRGLKERRHEYLSCVRVTQVISTAIILGLLWWHSDASSPKRLHDQAGLLFFISVFWGFFPVFTAIFTFPQERAMLAKERSVDMYKLSAYFMARNTSDLPLDLILPIVFLVIVYFMVGLKQSSSTFFLTMLTVFLSIVSAQGLGLAIGAAFMDVKKATTLGSVIVMTFMLSGGFFVQKVPPFMLWVRYISFNYHTYRLLLKIQYSCSSAGSGSVSCKSPFIKGLRLDDGGKEAAAMIAMVFGYRLLAYFFLRRMKLRTAT* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00651 785 Gene3D - 177 418 IPR027417 -
Eupl03g00651 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 197 413 IPR027417 -
Eupl03g00651 785 Pfam ABC-2 type transporter 521 729 IPR013525 GO:0016020|GO:0140359
Eupl03g00651 785 FunFam ABC transporter G family member 22 189 419 - -
Eupl03g00651 785 SMART AAA_5 211 402 IPR003593 GO:0016887
Eupl03g00651 785 CDD ABCG_EPDR 175 407 - -
Eupl03g00651 785 MobiDBLite consensus disorder prediction 55 76 - -
Eupl03g00651 785 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 178 425 IPR003439 GO:0005524
Eupl03g00651 785 Pfam ABC transporter 203 353 IPR003439 GO:0005524
Eupl03g00651 785 Pfam ABC-2 type transporter 382 445 IPR043926 GO:0140359
Eupl03g00651 785 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 156 772 - -
Eupl03g00651 785 MobiDBLite consensus disorder prediction 46 76 - -
Eupl03g00651 785 ProSitePatterns ABC transporters family signature. 325 339 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00651 Eupl-Chr3 25746436 25752349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00651 201 439 Calmodulin-binding Proteins AT2G36910 27.092 6.57e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00651 K05681 - nnu:104587924 1139.02