Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00646 ATGTCAACCAATCTCATCAATTTCTTTATCTTTTTTCTCATAATCTCAGTAGTCTATCTTCCACCCATCTCTGCTTTAAACCATGAAGGTCTTTCTCTCCTTTCATGGCTTTCAACCTTCAATTCCTCCTCCTCTGCTTCTCTCTTTTCTTCATGGAATCCAACCCACCAAAATCCATGCAAATGGGCTTACATTCAATGTTCCACAAATGGGTTTGTTTCAGAAATCTCAATCAAATCCATTAACATCCCCACTAGCTTCCCTAATCAGCTCCTCTCCTTCTACTCCCTCACCACACTTGTCATCTCAGGTGGGAATCTCACTGGACAGATCCCACCTTCCATTGCCAACTTGTCGTCTCTCATCACTCTCGACCTCAGTTTCAATTCATTTAGTGGAAAAATCCCTCCTGATATTGGAAAACTCTCTGAATTGCAGTCATTGTCCTTGAATTCCAACTCTTTACAAGGTGAAATTCCACCTGAAATCGCCAACTGTTCGAAGCTTCGACAGTTAGAACTCTTTGATAACGAGCTCTCAGGAAAGATTCCTGCACAGCTGGGCAAGTTATCGAGTCTAGAAGTTTTCCGGGCAGGAGGAAATCTGGGAATTTTCGGAGAAATTCCGGTGGAGATTTCAAACTGCAAAGGCCTAATTTTTCTGGGTCTTGCAGATACTGGGATTTCTGGACAGATTCCATATAGTGTAGGAGAATTGAAGAATCTCAAAACTCTTTCTGTCTATACTGCAAATCTCTCTGGTGAGATTCCACCGGAAATTGGTAACTGTTCTGCTCTAGAGAATCTGTTTCTGTATGAAAACAAATTGTCCGGTGAGATTCCTGCCATATTGGGTCTGCTAAAAAATCTCAAGAGGGTCTTGTTGTGGAAGAATAATCTAACAGGGAGCATACCAGGATCTATCGCCAACTGTTCGGGTTTGACAGTTATCGACTTGTCCTTGAATTCTCTAACTGGTGAACTTCCCCAGTTTCTCTCAAATTTAGGTGCATTAGAGGAGCTTCTGTTATCTGAAAACAACATTTCTGGAGCAATTCCTCCATTTATAGGCAATTTTTCCAGTCTGAAGCAGCTTGAATTGGATAACAACCGATTTTCGGGTGAGATTCCAGCTGAAATTGGGCGGTTGAAGGAGCTGTCTCTGTTCTTTGCATGGCAAAATCAGCTCCATGGGAGCATTCCCATTGAGTTGGGCAATTGTGGGAAACTTCAAGCTTTGGACCTTTCTCACAATTTCCTTTCTGGGTCACTTCCAAATTCTCTGTTCAATCTCAAGAATTTAACCGAACTCATGCTCATATCCAATGGACTCTCTGGTGAGATTCCACCAGATATAGGCAATTGCACTAGTTTGATCCGTCTGCGGCTGGGATTAAATCGGTTTTCAGGTCGAATCCCATCAGGAATTGGGTTTTTACATAGTTTGAGCTTCCTTGAATTGTCAGGGAATCAGTTATCAGGGGAAATCCCACTGGAGATCGGTAATTGCACTCAACTAGAAATGGTTGATTTGCATGAAAATAAGCTCCAAGGCATTATTCCTACCTCTTTCGAATTTCTTGTGGTTCTAAATGTTTTAGACCTTTCCATGAACAGAATTTCGGGTTCTGTTCCTGAGAATTTGGGTACGCTTGCATCGTTAAATAAACTCATGTTAAGTGGGAACTACATTACTGGTTTAATTCCCAAGTCCTTGGGTCTCTGCAAGGATTTGCAATTGTTGGATATGAGTAGCAACAGAATCACTGGTTCAATCCCTGATGAGATGGGTCGATTACAAGGACTTGATATCCTATTGAATTTAAGTTGGAATTCTTTGTCAGGCCCAATTCCAGAAGGATTCTCTAATCTGTCGAAGCTTGCGTCCTTGGATATCTCTCACAATATATTGACAGGAAGCCTGGGAGTATTGGGTATGCTTGATAATCTTGTTTCTTTGGATGTCTCATACAATAACTTCTCGGGTTATCTGCCTGATACAAAGTTTTTTAAAGAGCTCCCTCTAACTGTCCTTACTGGTAATCGAGAGCTCTGCATTAACAGGAATGAATGCAAAATTGACGAGACCCTCCATCGCAGAAATTCTACTAGAAATCTTATTTTCTGTGTTGCACTCAGTGTTATTGTAACTGTTTTTGTCATGGTTTTCGGAGTAATCGTCGTCATTCGAGCTCCTAGAATGGCGGTTGGAACAGATGAGGAAGAAAAGGGATTGGACTGGGAGTTCACCCCATTTCAGAAGCTGAACTTCTCTATAGATGAGGTTCTGATGAGATTGTCAGATTCCAATGTTGTCGGTAAGGGCTGTTCTGGAGTGGTTTACCGCGTCGAAACTCAATCAGAACAGGTGATTGCAGTGAAGAAGCTTTGGCCCACGAAGAATGGTGAATTTCCAGAGAGGGACTCATTTTCTGCAGAGGTTAAGACTCTTGGATCAATCAGGCATAAAAATATAGTGAGACTTCTGGGTTGCTGTACCAATGGGAAAACTAGATTGCTAGTGTTTGATTATATTAGTAATGGGAGTTTGGCTGGATTGCTTCATGAGAAGAAGGTGTTCTTGGACTGGGATTCAAGATATAAAATCATACTTGGTGCAGCTCAGGGTCTGGCCTATCTTCATCACGACTGTATCCCTCCAATCATTCATCGCGATATCAAAGCCAACAACATCTTGGTCGGACTACAATTCGAAGCTTATATCGCAGATTTTGGCCTTGCAAGGCTCATCGATTCTTCAGATCATTCGAAAACCTCTAACACAGTGGCGGGTTCTTACGGGTACATTGCTCCTGAGTATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTTTACAGCTATGGTGTGGTGCTTCTGGAGATCTTAACCGGTATGGAACCAACCGATCATCGCATACCAGAGGGAACCCACATTGTCAATTGGGTTAGACAGGAACTACGAAATACAGACGGAGAAGCTGCATCCATTCTTGATCAGCAACTTCAGTGCAGATCAGGTACTCAGATCCAAGAGATGCTTCAAGTGCTCGGTGTCGCTCTCTTATGTGTGAACCCTTATCCAGAGGAGCGACCCACCATGAAAGATGTAACAGTGCTGCTCAAGGAGATCAGACATGAAATGGAGGACTTCACCAAGCCCAGTTTGCTTGCCATGGCCAACACAAAGGCAGCAACCCACTCTACTAGTTTTTCTAGACCATCTGAACCCCTCATCATCAAATCATCTTCCTTGTTGTTATAG 3264 0.4259 MSTNLINFFIFFLIISVVYLPPISALNHEGLSLLSWLSTFNSSSSASLFSSWNPTHQNPCKWAYIQCSTNGFVSEISIKSINIPTSFPNQLLSFYSLTTLVISGGNLTGQIPPSIANLSSLITLDLSFNSFSGKIPPDIGKLSELQSLSLNSNSLQGEIPPEIANCSKLRQLELFDNELSGKIPAQLGKLSSLEVFRAGGNLGIFGEIPVEISNCKGLIFLGLADTGISGQIPYSVGELKNLKTLSVYTANLSGEIPPEIGNCSALENLFLYENKLSGEIPAILGLLKNLKRVLLWKNNLTGSIPGSIANCSGLTVIDLSLNSLTGELPQFLSNLGALEELLLSENNISGAIPPFIGNFSSLKQLELDNNRFSGEIPAEIGRLKELSLFFAWQNQLHGSIPIELGNCGKLQALDLSHNFLSGSLPNSLFNLKNLTELMLISNGLSGEIPPDIGNCTSLIRLRLGLNRFSGRIPSGIGFLHSLSFLELSGNQLSGEIPLEIGNCTQLEMVDLHENKLQGIIPTSFEFLVVLNVLDLSMNRISGSVPENLGTLASLNKLMLSGNYITGLIPKSLGLCKDLQLLDMSSNRITGSIPDEMGRLQGLDILLNLSWNSLSGPIPEGFSNLSKLASLDISHNILTGSLGVLGMLDNLVSLDVSYNNFSGYLPDTKFFKELPLTVLTGNRELCINRNECKIDETLHRRNSTRNLIFCVALSVIVTVFVMVFGVIVVIRAPRMAVGTDEEEKGLDWEFTPFQKLNFSIDEVLMRLSDSNVVGKGCSGVVYRVETQSEQVIAVKKLWPTKNGEFPERDSFSAEVKTLGSIRHKNIVRLLGCCTNGKTRLLVFDYISNGSLAGLLHEKKVFLDWDSRYKIILGAAQGLAYLHHDCIPPIIHRDIKANNILVGLQFEAYIADFGLARLIDSSDHSKTSNTVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEILTGMEPTDHRIPEGTHIVNWVRQELRNTDGEAASILDQQLQCRSGTQIQEMLQVLGVALLCVNPYPEERPTMKDVTVLLKEIRHEMEDFTKPSLLAMANTKAATHSTSFSRPSEPLIIKSSSLLL* 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00646 1087 SMART LRR_typ_2 431 455 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 359 383 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 142 166 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 118 141 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 335 358 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 647 671 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 479 503 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 551 574 IPR003591 -
Eupl03g00646 1087 SMART LRR_typ_2 239 263 IPR003591 -
Eupl03g00646 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 26 201 - -
Eupl03g00646 1087 Pfam Protein kinase domain 769 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00646 1087 SUPERFAMILY Protein kinase-like (PK-like) 766 1072 IPR011009 -
Eupl03g00646 1087 Gene3D Phosphorylase Kinase; domain 1 742 844 - -
Eupl03g00646 1087 ProSiteProfiles Protein kinase domain profile. 766 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00646 1087 Pfam Leucine Rich Repeat 409 431 IPR001611 GO:0005515
Eupl03g00646 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 409 695 - -
Eupl03g00646 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 845 1059 - -
Eupl03g00646 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 202 327 - -
Eupl03g00646 1087 Gene3D Ribonuclease Inhibitor 199 331 IPR032675 -
Eupl03g00646 1087 Gene3D Ribonuclease Inhibitor 606 693 IPR032675 -
Eupl03g00646 1087 Gene3D Ribonuclease Inhibitor 26 186 IPR032675 -
Eupl03g00646 1087 Gene3D Ribonuclease Inhibitor 524 605 IPR032675 -
Eupl03g00646 1087 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Eupl03g00646 1087 SUPERFAMILY RNI-like 352 670 - -
Eupl03g00646 1087 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Eupl03g00646 1087 ProSitePatterns Protein kinases ATP-binding region signature. 772 795 IPR017441 GO:0005524
Eupl03g00646 1087 Gene3D Transferase(Phosphotransferase) domain 1 845 1063 - -
Eupl03g00646 1087 SMART serkin_6 766 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00646 1087 Gene3D Ribonuclease Inhibitor 424 523 IPR032675 -
Eupl03g00646 1087 Gene3D Ribonuclease Inhibitor 332 423 IPR032675 -
Eupl03g00646 1087 ProSiteProfiles Leucine-rich repeat profile. 409 431 IPR001611 GO:0005515
Eupl03g00646 1087 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 742 844 - -
Eupl03g00646 1087 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 285 1043 - -
Eupl03g00646 1087 SUPERFAMILY L domain-like 38 397 - -
Eupl03g00646 1087 Pfam Leucine rich repeat 505 564 IPR001611 GO:0005515
Eupl03g00646 1087 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Eupl03g00646 1087 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00646 Eupl-Chr3 25670447 25674012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00646 22 1046 Receptor kinase-like Gene Family AT5G56040 49.131 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl03g00646 Pkinase 9.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00646 - - nnu:104590628 1626.68