Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00638 ATGGCTTCTCTCCTACCTCTCCTCATCTTCTTCTTATTTCTCTCTTCTGCATCTGCATCCGCAATCCGTCCTCACTCGAAACTGCTCCATTTCAGCCAAACCCAGGTATCAAAACCAATACCGAAACAGCTAATGAATTCAATCCCATTCTCACCAGAGATCCACCAAGCCTGCAAAGCTACCCAGTTCCCAGAAACCTGCGAAACAGCTCTAGTCCAATCGGTTTTTAATCTCTCCCAGAATCCCAAACCCATCGAAATCATCAAATCCGCCATTTGGGTCTCGACCCAGAATCTCAAAACAGCTCAATCAATGGTGAAAACCATCCTTCACTCTTCTTCCGGCAACGTAAACCGCTCTACGGCCGCGAAGAACTGCTTAGAGATCCTCCACAATTCGGAATACCGCCTATCTTCAACGATCCAGGTTCTGCCACGTGGCAGAATCAAGGACGCTCGTGCATGGATGAGCGCAGCACTTCACTACCAGTACGGTTGCTGCTCCGCCCTTACAAAGTTCAACGAAAGTCAGGCGGTCAACGAAACGGTGGCGCTAATGAGCTCGTTGATTGGATTGACCAGTAATGCTCTTAGTATGATGGTTTCGTACGACTTGTTTGGGAATGAAACCGCTTTGTGGAAACCGCCTATGACCGAGAGATCTGGGTTTTGGGAGGACGGTGAGATTGGTGGGGCGTACTTCGGGTTCAAAGGCGGTTTTCCGTCAGGGTTAACGGAAGACATGACAGTGTGTAAGCAGGATGGGGTAGGATGTTTAAAGACGGTGCAGGCAGCGGTGGATGTGGCGCCGGATAACGAGGAGGTGCGTAGGTTTGTGATACGGATTAAGGAAGGGGTTTACGAAGAGACAGTTAGGATTCCGTTGGAAAAGAAGAATGTGGTCTTTTTGGGAGATGGGAAGGGCAAAACCGTCATTACGGGATCGTTAAAGGTAGACCAATCTGGCCTTTCCACGTACAATACGGCAACCGTCGGTGTCATCGGCGACGGATTCATGGCCCGTGATCTCACATTCGAGAACACGGCGGGTCCTGATGCTAAACAAGCCGTAGCATTCCGATCAGACAGTGATCTATCCATCATCGAAAACTGCGAATTCATCGGCAATCAAGACACACTCTATGCTGTCTCCCTACGCCAATTCTACAAATCATGTTGCATCCAAGGCAACATCGATTTCATTTTCGGAAACTCGGCCGCTGTCTTCCAAGACTCCCTCATTCTAATCCGACCCCGTCAAATCTCCCCCGAAAAGGGCGAGAACAATGCAATAACAGCTCACGGCCGAACAGACCCCGCACAATCGACAGGATTTGTTTTTAAAAATTGCGTGATCAACGGCACCGATGACTACATGGCCTTGTACTATAACAAGCCCAAGGTTCATAAGAACTACTTGGGTAGGCCATGGAAGGAATACACAAGAACTGTCTTCATACATTGTTATATGGATGCCCTAATTACTGAACAAGGTTGGATGGCCTGGAGCGGAGATTTTGCGCTATCGACATTATATTATGGCGAGTTCAAAAATTTCGGCCCGGGGGCTAATGTATCGGCTAGGGTACCATGGAGTAGCCAGATTCCTAAAGAGCATGTTTATGCGTATTGCATTAAAAATTTCATTCAGGGTGAGGAGTGGATCCCGTCATCTTCTTGA 1680 0.4827 MASLLPLLIFFLFLSSASASAIRPHSKLLHFSQTQVSKPIPKQLMNSIPFSPEIHQACKATQFPETCETALVQSVFNLSQNPKPIEIIKSAIWVSTQNLKTAQSMVKTILHSSSGNVNRSTAAKNCLEILHNSEYRLSSTIQVLPRGRIKDARAWMSAALHYQYGCCSALTKFNESQAVNETVALMSSLIGLTSNALSMMVSYDLFGNETALWKPPMTERSGFWEDGEIGGAYFGFKGGFPSGLTEDMTVCKQDGVGCLKTVQAAVDVAPDNEEVRRFVIRIKEGVYEETVRIPLEKKNVVFLGDGKGKTVITGSLKVDQSGLSTYNTATVGVIGDGFMARDLTFENTAGPDAKQAVAFRSDSDLSIIENCEFIGNQDTLYAVSLRQFYKSCCIQGNIDFIFGNSAAVFQDSLILIRPRQISPEKGENNAITAHGRTDPAQSTGFVFKNCVINGTDDYMALYYNKPKVHKNYLGRPWKEYTRTVFIHCYMDALITEQGWMAWSGDFALSTLYYGEFKNFGPGANVSARVPWSSQIPKEHVYAYCIKNFIQGEEWIPSSS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00638 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 51 202 IPR035513 -
Eupl03g00638 559 FunFam Pectinesterase 4 244 559 - -
Eupl03g00638 559 Gene3D - 243 559 IPR012334 -
Eupl03g00638 559 CDD PMEI-like_3 57 200 - -
Eupl03g00638 559 Pfam Plant invertase/pectin methylesterase inhibitor 54 199 IPR006501 GO:0004857
Eupl03g00638 559 PANTHER PECTINESTERASE 22 556 - -
Eupl03g00638 559 Pfam Pectinesterase 249 552 IPR000070 GO:0030599|GO:0042545
Eupl03g00638 559 FunFam Probable pectinesterase/pectinesterase inhibitor 51 52 202 - -
Eupl03g00638 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 200 IPR035513 -
Eupl03g00638 559 SMART PMEI_2 49 199 IPR006501 GO:0004857
Eupl03g00638 559 SUPERFAMILY Pectin lyase-like 249 557 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00638 Eupl-Chr3 25513082 25516579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00638 50 559 Carbohydrate Esterase AT5G09760 63.938 0.0 670
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00638 - - nnu:104587941 830.861