Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00628 ATGTCGAGCACAGCTGGTCAGGTCATTCGGTGCAGAGCTGCTGTGGCATGGGAAGCAGGGAAGCCACTGGTGATAGAAGAAGTGGAGGTAGCGCCTCCACAGACGATGGAGGTTCGTTTGAAGATCCTCTACACCTCACTTTGCCATACCGATGTTTACTTCTGGGAAGCGAAGGGACAAACCCCAGTTTTTCCTCGCATTTTCGGCCATGAAGCTGGAGGGATCGTTGAGAGCGTTGGTGAGGGTGTGACGGATCTCAAGCCAGGAGATCATGTCCTTCCTGTGTTCACTGGGGAGTGTAAGGAGTGCCGCCACTGTAAATCAGAGGACAGTAACATGTGTGACCTCCTGAGGATCAACACCGACAGAGGTGTTATGATCAATGATGGAAAGTCGAGGTTCTCCATCAAAGGGAAGCCCATATACCACTTTGTTGGCACCTCCACCTTTAGTGAGTACACTGTGGTCCATGTCGGATGTGTCGCCAAGATCAACCCTGCAGCTCCACTTGACAAAGTTTGCATTCTCAGCTGTGGGATCTCTACAGGTCTTGGTGCTACCTTGAATGTTGCAAAACCAAAAGAGGGTTCAACAGTAGCCATTTTTGGATTAGGAGCTGTAGGCCTTGCTGCTGCTGAAGGTGCTAGAATTGCGGGGGCTTCCAGAATTATTGGTGTCGATTTGAACTCTAACAGATTCATTGAAGCTAAGAAGTTTGGTGTTACCGAGTTTGTGAACCCGAAAGATCACGACAAACCAGTTCAAGAGGTGATTGCTGAGATGACAGATGGAGGAGTGGACCGAGCATCGAGTGTACTGGCAGCATCAGTGCCATGA 837 0.4982 MSSTAGQVIRCRAAVAWEAGKPLVIEEVEVAPPQTMEVRLKILYTSLCHTDVYFWEAKGQTPVFPRIFGHEAGGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEDSNMCDLLRINTDRGVMINDGKSRFSIKGKPIYHFVGTSTFSEYTVVHVGCVAKINPAAPLDKVCILSCGISTGLGATLNVAKPKEGSTVAIFGLGAVGLAAAEGARIAGASRIIGVDLNSNRFIEAKKFGVTEFVNPKDHDKPVQEVIAEMTDGGVDRASSVLAASVP* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00628 278 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Eupl03g00628 278 FunFam S-(hydroxymethyl)glutathione dehydrogenase 183 276 - -
Eupl03g00628 278 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 269 IPR036291 -
Eupl03g00628 278 Pfam Zinc-binding dehydrogenase 206 269 IPR013149 -
Eupl03g00628 278 PANTHER ALCOHOL DEHYDROGENASE 6 270 - -
Eupl03g00628 278 Pfam Alcohol dehydrogenase GroES-like domain 37 162 IPR013154 -
Eupl03g00628 278 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Eupl03g00628 278 Gene3D - 3 187 - -
Eupl03g00628 278 Gene3D - 188 276 - -
Eupl03g00628 278 SUPERFAMILY GroES-like 4 186 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00628 Eupl-Chr3 25309441 25312663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00628 1 270 Monolignol Biosynthesis Gene Families AT1G72680 25.461 5.22e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00628 K18857 - pop:112328255 498.049