Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00613 ATGGTGCCATCAGGGCCTCCGACTCCCATCGGTGGCGCCCAGTCTGTTTCACCTTCACTTTTGCGGTCAAACTCTGGCATTTTGGGATCTCAAGGGGGTGCAGTTCCTTCACAGCCCACATATCCTTCCCTTGTTTCACCTCGCACTCAATATGGTAACATCAACTTGCTTGGAAACATGTCCAATGTTTCCTCCCTCCTCAATCAATCCCTTGGGAATGGTGGTTCGAATTCTGGCTTTTCTGGTTCAATGAGTCTCCAACGTGGAGGTGTTGATACAGGAGCCGAGTCTGATCCACTTTCTAGCATAGGAAATGGCATGGGTTTTACTCATTCCCCTTTGTCATTCGCACCATCAAACACAAATCCCAGCTCTTCTGGTCAATCCCAGGGGCAGCAATTTCCCAACTCTTCTGGCAACCAACTTGCACAAGATCAACAGCAGCCTCAACAGCTTGAGCCCCAGAACTTCCAGCACAGCCAGCAGTCAATACAAAAGTTCCATGTTCCCCACACTCAGCAGCAGCAGCAATATCAATCAATTCGAGGTGGGTTAGGCGGTGTGGGCCCCGTTAAGTTGGAGCCGCAGATGAGTAATGATCAAAATGGGCAGCAGCAACAGTTGCAGTCCTTACGGAATCTGAGTCAGGTGAAATTGGAGCCACAACAGATGCAGTCTTTGAGAAGCTTGGCACCAGTCAAAATGGAGCCCCAACATTCGGATCAGTCGTTGTATCTGCATCAACAACAGCAACAGCAACAGCAACAACAGCAATTCCTCCACATGTCCAGGCAGTCTTCTCAGGCTGCTGCTGCCCAGATGAATATTTTGCAACAACAGCGACTCTTGCAGCTGCAGCAGCAACAACTCCTGAAGGGACATCCTCAGCAACGGTCTCAATTGCAGCAGCAGTTCCAACAGCAGAATTTGCCTGCAAGAACTGCTGTTAAACCAGCCTATGAGCCTGGGATGTGTGCTCGGCGTTTGACGCATTACATGTATCACCAACAACACAGACCAGCTGATAACAATATTGAATTCTGGAGAAAATTTGTTGCTGAGTACTTCGCTCCCCATGCCAAGAAGAGGTGGTGTGTTTCTTTGTACGGAAGTGGACGGCAGACAACTGGTGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAATCGTAAGCCCGGCCGTGGTTTTGAAACAACTGTTGAGGTTTTACCCAGGCTGTGCAAAATCAAGTATGATAGTGGTACGTTGGAAGAACTTCTTTATGTCGATATGCCGAATGAATATCCTAATGCATCAGGTCAAATTGTCCTGGATTATGCAAAAGCAATACAGGAAAGTGTATTTGAGCAACTACGTGTAGTTCGTGATGGTCAACTTCGTATTGTTTTCGCTCCAGATTTAAAGATTTGTTCTTGGGAGTTTTGTGCTAGACGTCATGAGGAGCTTATCCCTCGAAGATTGATAATACCTCAGGTTAGTCAACTCGGTGCAGTGGCTCAGAAGTATCAAGCTGCTACTCAAAATGCATCATCCAACCTATCGGCTCAAGAGTTGCAAAATACCTGTAGTATGTTTGTTGCATCAGCTCGTCACTTGGCAAAAACCTTGGAGGTGCCATTAGTAAATGATTTAGGATATACGAAGAGATATGTGAGGTGCCTTCAGATATCAGAGGTGGTTAATAGTATGAAAGATTTGATTGATTATAGCCGAGAAACAGGGACTGGACCTATGGCAAGCTTGATCGACTTCTCTCGGAAGAACAGTGCTTCTTCTGGGATCCATGGTCAAGGTCAGCAACCAGAGGAGCAGCAGCCGCAAACCATTGCTCAGACCTCAAACAATGATCAGAGTTCTGTCCAGGCCACTGCCATGCTTGCTGCTGGCAATGGTGTTGTCAGTGTAAACTCTCCCAACACTGCATCCGCCTCCACCTCTGCCAGCACCATAGTTGGGCTTCTCCATCAGAACTCCATGAACAACAGACAGGAGAATCTGATGAATGCAAACAGTCCCTTTGGTGGGAGCACAGTTCATATTCCGTCTGCAGGCTCCTCCAGTTCACTAACACAGGCTCAACCCAACCCATCTTCTCCATTCCCATCACCGACACCATCCATGTCTAGCAATCCTCCACAGGTTTCTCCTAGCGCCTTACCAGCAGCAGCCGCTGCCACACACATGGGTGCTGCAAATTCGCCTGCAAATCTGTCTATGCAACAACCAGCTCAGTCCAATGAAGCTGACCCAAATGATTCCCAGAGTTCTGTCCAGCAAATCATACAAGAAATGATGACGTCGTCCCAGCTAAATGGAGGGGGTAACATGGTTGGTGTTGGTTCTCTACGGAACGACATGAAAAACATAAATGGGATATCACAAACAGGAAACACAGCTCTTAACGGTGGGAACTGCCTAGTTGGGAATGGGATAGCAAACAGCAATTCAAGTATTGGTGGTGTTGGTTTCGGCAACATGAATGGCGGAATTGGTCTGTCCGCCACTGCTAATGGAATCAGAGCAGCTGTGGGCAATAACTCTGTGATGAATGGAAGGGTAAGCATGCCTTCAATGCCTCAGGACCCAAGCATGAACCATCAGCAGCAGGATCTGGGGAATCGGCTGTTAAGTGGGCTTGGAGCAGTAAACAGCTTCAATAATATCCAATTCGATTGGAAATCATCTCCTTAA 2694 0.4748 MVPSGPPTPIGGAQSVSPSLLRSNSGILGSQGGAVPSQPTYPSLVSPRTQYGNINLLGNMSNVSSLLNQSLGNGGSNSGFSGSMSLQRGGVDTGAESDPLSSIGNGMGFTHSPLSFAPSNTNPSSSGQSQGQQFPNSSGNQLAQDQQQPQQLEPQNFQHSQQSIQKFHVPHTQQQQQYQSIRGGLGGVGPVKLEPQMSNDQNGQQQQLQSLRNLSQVKLEPQQMQSLRSLAPVKMEPQHSDQSLYLHQQQQQQQQQQQFLHMSRQSSQAAAAQMNILQQQRLLQLQQQQLLKGHPQQRSQLQQQFQQQNLPARTAVKPAYEPGMCARRLTHYMYHQQHRPADNNIEFWRKFVAEYFAPHAKKRWCVSLYGSGRQTTGVFPQDVWHCEICNRKPGRGFETTVEVLPRLCKIKYDSGTLEELLYVDMPNEYPNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFAPDLKICSWEFCARRHEELIPRRLIIPQVSQLGAVAQKYQAATQNASSNLSAQELQNTCSMFVASARHLAKTLEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMASLIDFSRKNSASSGIHGQGQQPEEQQPQTIAQTSNNDQSSVQATAMLAAGNGVVSVNSPNTASASTSASTIVGLLHQNSMNNRQENLMNANSPFGGSTVHIPSAGSSSSLTQAQPNPSSPFPSPTPSMSSNPPQVSPSALPAAAAATHMGAANSPANLSMQQPAQSNEADPNDSQSSVQQIIQEMMTSSQLNGGGNMVGVGSLRNDMKNINGISQTGNTALNGGNCLVGNGIANSNSSIGGVGFGNMNGGIGLSATANGIRAAVGNNSVMNGRVSMPSMPQDPSMNHQQQDLGNRLLSGLGAVNSFNNIQFDWKSSP* 898
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00613 897 MobiDBLite consensus disorder prediction 697 711 - -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 589 618 - -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 78 207 - -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 665 696 - -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 10 46 - -
Eupl03g00613 897 PANTHER LIM DOMAIN-BINDING PROTEIN 200 886 IPR029005 -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 98 182 - -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 1 46 - -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 665 758 - -
Eupl03g00613 897 Pfam LIM-domain binding protein 328 582 IPR029005 -
Eupl03g00613 897 MobiDBLite consensus disorder prediction 732 758 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00613 Eupl-Chr3 24958806 24986470 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00613 1 895 C2H2 Transcription Factor Family AT1G43850 57.447 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00613 - - nnu:104606755 1203.73