Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00610 ATGCCTGCTTGGTGGGGGAGAAAACCTCACAAAAGCAACAAAGAAGAACAAAATTCTTCTGAGAAGAAAGGCAAAGAGAAAGCTAAGAGCTTCGACGAGATTCCTAGCTCCCGGAATTCTCCCAGGACCAGTAAGGAATTCTTATCTACTGCTACTGCTTCTACTGCTACTGCTGTTTTTGTTTTTGGGTGTTCTTCTTTGGGTTCGAGTTTCGAATCGGATTTGGAGAAGAGAGGGCATCCTTTGCCTCGACCGTCTGCGTCATCGGCTCCGTCTTTGATTCACGATCATGGGGTCGGATTGGGTTCTGGGTCGGTCTCCGTTTCGAGCGTTAGCTCTTCTGGGTCTTCTGATGACCCACTGCTCGATTTTGGATTCGTCGGTCTTTCCAGAGGACATGGGGAAACCAAGGTCAGCCCAAGATCAAGAAGTCCAGCTCCAGGATCAAGAGTGCCTGCCATTTCAACATCACCTTTACATCAACGTGTGTGTGGAATGAGTCCGGAGTCTCAGCCGATAAAGCAAGATGAGGGGAAGAGTGTGTGTCATCCCCTGCCACTTCCTCCTGGTTCTCCTACCAACCCTTGCACTTCACCCACCATAAGAAGTATTGCAGCCAATGACAATTCACATTGTCTTCGATCAAAATGGATTAAGGGAAAGCTTCTAGGAAGGGGGACATTTGGGCATGTTTATTCTGGATTCAACAGTGAAAAGGGGCAAATGTGTGCTATAAAGGAAGTCAAGGTCATTTCTGATGATCAAAGCTCAAAAGAATCCCTCAGACAACTAAATCAGGAGATAACGTTGCTCGGTCAGCTCTCACATCCAAACATTGTTCGATACTATGGAAGCGAATTGGGGGAAGATGCACTCTCTGTATATTTGGAGTATGTCTCTGGGGGCTCCATCCACAAATTACTCCAGGAATATGGCCCTTTTAAGGAACCTGTTATTCAAAGTTACACCAGGCAAATCCTTTACGGTCTTTCCTACTTACATGGAAGGAATACAGTGCATAGGGATATTAAAGGGGCAAACATACTTGTAGATCCTAATGGTGAAATCAAACTTGCAGACTTTGGCATGGCTAAACATATGACATCTTGTGCTTCTATGCTTTCTTTCAAAGGTAGCCCTTACTGGATGGCACCTGAGGTTATAATGAATTCTAGTGGCTACAGTCTCGCAGTGGATATTTGGAGCTTAGGATGTACAATACTGGAGATGGCTACATCAAAACCACCTTGGAGCCAGTTTGAAGGGGTGGCTGCTATATTTAAAATCGGAAATAGCAAAGATATTCCTGAAATCCCTGATCATCTTTCTAATGATGCAAAGAGTTTTCTAAATCTCTGCCTGCAACGGGATCCATCTGCACGTCCTACGGCCACACAACTACTGGATCACCCTTTTATACGAGACCAAGCTGCAGCAAAAGGTTCAAAGATCCATATAATTAATGATGTCTTTCCTTCTTCCCTTGATGGAAGCCATGCACCGACAGGCTCGGATATACATTCCAATAAAACGAATATTACCTCCCGGGATGGAGAGTACGGAATGAAACCTATGGTCACATCTTCAAGAGCTTTGAAGAACCCAAGTCAATCTATCTGCAGGGATAATGCGAGAATGAACATGTCTTTGCCTGTGTCTCCCTGTTCAAGTCCATTACGACAATATGGGCCTGCACACAGGAGCTGTTTTCTATCTCCCCCCCATCCGACTTATACAATGTTGGGACAAAGTGATGGTTATGGCCTAAACAATTTTTCAGGCTTGTCCACAAGACAGTACACGAACAATCCTGCTGACCCTTGGGTAGACATCTCCCAACTGAAATCCCATACACCTGGTGGATCCCCAAGGATGAGAGCCATTTGA 1887 0.452 MPAWWGRKPHKSNKEEQNSSEKKGKEKAKSFDEIPSSRNSPRTSKEFLSTATASTATAVFVFGCSSLGSSFESDLEKRGHPLPRPSASSAPSLIHDHGVGLGSGSVSVSSVSSSGSSDDPLLDFGFVGLSRGHGETKVSPRSRSPAPGSRVPAISTSPLHQRVCGMSPESQPIKQDEGKSVCHPLPLPPGSPTNPCTSPTIRSIAANDNSHCLRSKWIKGKLLGRGTFGHVYSGFNSEKGQMCAIKEVKVISDDQSSKESLRQLNQEITLLGQLSHPNIVRYYGSELGEDALSVYLEYVSGGSIHKLLQEYGPFKEPVIQSYTRQILYGLSYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHMTSCASMLSFKGSPYWMAPEVIMNSSGYSLAVDIWSLGCTILEMATSKPPWSQFEGVAAIFKIGNSKDIPEIPDHLSNDAKSFLNLCLQRDPSARPTATQLLDHPFIRDQAAAKGSKIHIINDVFPSSLDGSHAPTGSDIHSNKTNITSRDGEYGMKPMVTSSRALKNPSQSICRDNARMNMSLPVSPCSSPLRQYGPAHRSCFLSPPHPTYTMLGQSDGYGLNNFSGLSTRQYTNNPADPWVDISQLKSHTPGGSPRMRAI* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00610 628 ProSiteProfiles Protein kinase domain profile. 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00610 628 MobiDBLite consensus disorder prediction 133 154 - -
Eupl03g00610 628 ProSitePatterns Protein kinases ATP-binding region signature. 223 246 IPR017441 GO:0005524
Eupl03g00610 628 Gene3D Transferase(Phosphotransferase) domain 1 215 502 - -
Eupl03g00610 628 MobiDBLite consensus disorder prediction 70 98 - -
Eupl03g00610 628 FunFam Mitogen-activated protein kinase kinase kinase 215 497 - -
Eupl03g00610 628 Pfam Protein kinase domain 219 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00610 628 MobiDBLite consensus disorder prediction 1 49 - -
Eupl03g00610 628 MobiDBLite consensus disorder prediction 8 33 - -
Eupl03g00610 628 CDD STKc_MEKK1_plant 216 473 - -
Eupl03g00610 628 MobiDBLite consensus disorder prediction 34 49 - -
Eupl03g00610 628 MobiDBLite consensus disorder prediction 498 520 - -
Eupl03g00610 628 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 20 483 - -
Eupl03g00610 628 SMART serkin_6 217 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00610 628 MobiDBLite consensus disorder prediction 498 516 - -
Eupl03g00610 628 SUPERFAMILY Protein kinase-like (PK-like) 215 558 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00610 Eupl-Chr3 24801302 24807532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00610 1 498 MAP Kinase Kinase Kinase AT1G53570 60.659 1.89e-180 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Eupl03g00610 Pkinase 3.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00610 K04421 - nnu:104606749 791.571