Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00596 ATGGCTGCCATGAACTCTAGTGTGTTAGCATGCAGCTATGCCATCTCAGGCAACCTATCGTCCGATGCCAATTGGAAGCTCGCATCAATGCCGTCGGTTGCCTCGCCAGTTGTTTCGGGGCCTAAATTGCCAATGATCAGGGCTCAACAAACTAGAGTTCCTGAATCAAAGGAAGCAAGAGGAAGTGAAGGAAGAAGAGCTGCACTTCTTGGCTTGGCAGCCGTTCTTTTCGCTTCCTCCGCGTCCTCCTCATCTGCCAATGCCGGCGTCATAGAAGAGTACCTTGAGAAGAGCAAGGCTAACAAGGAACTGAATGACAAGAAGAGATTGGCTACAAGCGGAGCAAACTTCGCACGTGCGTACACGGTTGAGTTCGGCACTTGCAAGTTCCCCGAGAACTTCACCGGCTGCCAAGATCTCGCTAAGCAAAAGAAAGTGCCATTCATTAGTGAGGACATAGCTTTGGAGTGTGAAGGGAAGGATAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGA 522 0.4962 MAAMNSSVLACSYAISGNLSSDANWKLASMPSVASPVVSGPKLPMIRAQQTRVPESKEARGSEGRRAALLGLAAVLFASSASSSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGTCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00596 173 Gene3D - 89 173 IPR044907 -
Eupl03g00596 173 FunFam Photosystem I reaction center subunit N 89 173 - -
Eupl03g00596 173 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 173 IPR008796 GO:0009522|GO:0015979
Eupl03g00596 173 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 173 IPR008796 GO:0009522|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00596 Eupl-Chr3 24574265 24575981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00596 1 144 Calmodulin-binding Proteins AT5G64040 63.514 1.92e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00596 K02701 - nnu:104606730 261.536