Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00573 ATGGTGCAATGCTGCACAGAAATAATTAAGTTTTCTGTTTTCAGTCCTAAGAGTATGAGCTCTCCATCAACTCAGTTTGCTACCTCAAGAAGGATGGGTATATACGAACCACCTCACCAGGTTAGCATGTGGGTGGACTCCTTTAAAGCTGATAGCAGTCCAAATACAGGCACATCCACGATTGTAGAGGTGGACACAAAGCTTGATAGCAAGTCCGAAGATACTTCTCATGGAACGCTAGGATCTTTGAAAAAGTATGATCAAGAAGCAACCAAACCTGCTGATAAGGTATTAAGACGTCTTGCACAAAATCGTGAGGCTGCCCGCAAAAGTCGCTTGCGGAAAAAGGCCTATGTTCAACAGTTGGAGACAAGTCGTTTGAAGCTGACGCAATTAGAGCAGGAGCTTGAGCGAGCTAGGCAGCAGGGTGTACACATAGGTGGTGCATTAGATACTAGTCATCTAGGGTTGTCCGGAAATGTTAACTCAGGGGTTGCTGCATTTGAGATGGAATATGGACACTGGGTGGAAGAACAAAATCGACAGATTCGTGAACTAAGAACTGCTTTGCAAGCTCATGTAACTGATATAGAGCTTCGCATACTTGTTGATAGTGGCATGAACCTCTATTACAATCTTTTCCGCATGAAAGAGGCTGCTGCAAAAGCTGATGTCTTCTATTTGATGTCTGGCATGTGGAAAACGTCAGCTGAACGCTTTTTTCTGTGGATTGGAGGATTTCGCCCGTCAGAGCTTCTAAAGGTTCTCACGCCCCAACTTGATCCGTTGACAGAGCAACAACTTTTAAATGTCTGTAACCTGCAACAATCATCTCAGCAAGCTGAAGATGCTCTTGCTCAAGGGATGGATAAACTGCAGCAAACTCTTGCCGAGACTCTAGCAGCCGATCCATTGGGTGCAGGAAGTTACATGTCACAGATGGCTACGGCGATGGAGAAGTTGGAAGCTCTTGTGAGCTTTGTGAACCAGGCAGACCACCTTCGCCATCAGACCCTGCAGCAGATGTCCCGCATCCTAACAACCCGCCAAGCAGCCCGAGGCTTGCTTGCCTTAGGGGATTACTTCCAACGTCTACGGGCTCTAAGTTCCCTCTGGGCTGCTCGTCCTCGCGAACCAGCCTAA 1143 0.4716 MVQCCTEIIKFSVFSPKSMSSPSTQFATSRRMGIYEPPHQVSMWVDSFKADSSPNTGTSTIVEVDTKLDSKSEDTSHGTLGSLKKYDQEATKPADKVLRRLAQNREAARKSRLRKKAYVQQLETSRLKLTQLEQELERARQQGVHIGGALDTSHLGLSGNVNSGVAAFEMEYGHWVEEQNRQIRELRTALQAHVTDIELRILVDSGMNLYYNLFRMKEAAAKADVFYLMSGMWKTSAERFFLWIGGFRPSELLKVLTPQLDPLTEQQLLNVCNLQQSSQQAEDALAQGMDKLQQTLAETLAADPLGAGSYMSQMATAMEKLEALVSFVNQADHLRHQTLQQMSRILTTRQAARGLLALGDYFQRLRALSSLWAARPREPA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00573 380 ProSiteProfiles DOG1 domain profile. 165 375 IPR025422 GO:0006351|GO:0043565
Eupl03g00573 380 MobiDBLite consensus disorder prediction 69 88 - -
Eupl03g00573 380 PANTHER TRANSCRIPTION FACTOR TGA9 19 378 - -
Eupl03g00573 380 Coils Coil 115 142 - -
Eupl03g00573 380 Pfam bZIP transcription factor 94 136 IPR004827 GO:0003700|GO:0006355
Eupl03g00573 380 SUPERFAMILY Leucine zipper domain 96 138 IPR046347 GO:0003700|GO:0006355
Eupl03g00573 380 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 99 114 IPR004827 GO:0003700|GO:0006355
Eupl03g00573 380 Coils Coil 176 196 - -
Eupl03g00573 380 Gene3D - 95 145 - -
Eupl03g00573 380 FunFam BZIP family transcription factor 95 144 - -
Eupl03g00573 380 Pfam Seed dormancy control 182 257 IPR025422 GO:0006351|GO:0043565
Eupl03g00573 380 SMART brlzneu 92 155 IPR004827 GO:0003700|GO:0006355
Eupl03g00573 380 CDD bZIP_HBP1b-like 96 148 - -
Eupl03g00573 380 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 94 138 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00573 Eupl-Chr3 23956496 23974149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00573 19 379 Calmodulin-binding Proteins AT5G10030 71.074 0.0 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl03g00573 DOG1 3.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00573 K14431 - ming:122083871 589.726