Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00571 ATGGATTTGGAGGAGCAGAGCTTTAAGCCTCAGTTGAGGCCCAATACTGGCTCAATCTGGTTCAAAATTGAGGACCTTGATAAGGCCACTGATGATTTCTCGCAGAAGAATTTAATTGGGCATGGAGGTTTCGGAGTTGTGTACAAGGGAATTCTATCTGATGGATCTTTGGTCGCGGTGAAGAGGATCGTAGAATCTAAATTTCAAGGTGACGCGGAATTCTGCAATGAAGTGGAGATCATTAGCAACTTGAAACATCGGAATCTCGTTCCACTGAGAGGCTGCTGTGCAACTGATGATGTTGAACAAGAAAAGCAATGGTATCTTGTCTACGATTACATGCCGAATGGAAACCTCGACGATCACCTTTTCTTCACTGGCAACAACAGGAAACCACTGAATTGGCCTCAACGGAAGCATAATCTTGGATGTAGCAAAGGGGCTTGCCTATCTTCACTATGGAGTGAAACCAGCAATCTATCACAGAGATATCAAGGCTACCAACATACTCCTGGATGCAGAAATGAAGGCAAGAGTAGCGGATTTTGGGCTGGCCAAGCAGAGCAGAGAAGGGCAGTCTCATCTCACCACTAG 594 0.4545 MDLEEQSFKPQLRPNTGSIWFKIEDLDKATDDFSQKNLIGHGGFGVVYKGILSDGSLVAVKRIVESKFQGDAEFCNEVEIISNLKHRNLVPLRGCCATDDVEQEKQWYLVYDYMPNGNLDDHLFFTGNNRKPLNWPQRKHNLGCSKGACLSSLWSETSNLSQRYQGYQHTPGCRNEGKSSGFWAGQAEQRRAVSSHH* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00571 197 Pfam Protein kinase domain 34 123 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00571 197 Gene3D Phosphorylase Kinase; domain 1 3 113 - -
Eupl03g00571 197 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 138 - -
Eupl03g00571 197 ProSitePatterns Protein kinases ATP-binding region signature. 39 61 IPR017441 GO:0005524
Eupl03g00571 197 ProSiteProfiles Protein kinase domain profile. 33 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00571 197 SUPERFAMILY Protein kinase-like (PK-like) 17 140 IPR011009 -
Eupl03g00571 197 FunFam Receptor-like serine/threonine-protein kinase At4g25390 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00571 Eupl-Chr3 23899062 23899655 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00571 4 139 Receptor kinase-like Gene Family AT1G11050 72.263 2.40e-64 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Eupl03g00571 Pkinase 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00571 - - rcu:8278562 220.32