Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00570 ATGAGGACGTCTGTCTTCTTCTCCTCTCTCCTCTACCTCCTCTCCTCCTTCTCCTTTGCATCTGTTCATGCTGCCTCTGCTTCTGCTTCTGCTTGCCCGATCGATCTCGGCTACATCGAAACCTTCCCATGGGACACGTCGTTGTGCCGAGACGACAACCAACACTGTTGCCAGACTCTACTTAGTCTCTTTGGTATGGGACTTTCTCGGCACCTCAAGGACACTAACATGTTCCAACTACCCAATGCAGTTTCTTCGTCCGCTTGCCACGTCGAATTCCAAACTAGGCTTGCAGCGATGTCGTTGCAACCATCGTTGGTGCCTATGTGTTTCAATGATTCAACTCAATTCATTGTTAGTCCTTCAAGCTGTGCCGGAATAATTACAACCCAAGATTGGGTACAAAAGGTTGGTGCAACAACCCAATTGGATGATTATTGCAAGGAAGAATTATCTGGACTGACTTCATGTAGCTCGTGCCTTGCGGCCGGTATGAAGGTGACGTCACAGCTGGTGTCGCTAGACAAGAATGCTACAAAGTGCTTTTACTTCACAGTTCTATATGCAGCTGGCATTGTTAGCCAACCAGGTCCAGAGGATATTAAGACTGCTGCTTGTATACTTGGCTTGCCACTAGCAGATTCAGCTATTAAAAAGACGTCTGACGGCCCAGAGCGAGGTCGCTTATTCAAATTTATTTTTGGGTTCATTGGTGCTTTCATATCTGTTGTGGTTTTATTGGGATCAGTCATGCTCTATTGGTTTTGGGATAAGCGGAAGAAGCGCAAGGCGGCTCATGCAGAATTCGTCGGCAATTTCAAGGCTAGTTTGAGACTCAATACGGGAGTTACGTGGTTTCGATTAGGCGATCTCGAACGTGCCACTGATGGGTTCTCCCAGAGGAATCTGATCGGTCGAGGTGGATATGGGGTGGTGTACAAGGGGACCCTCTCAGATGGTACTACAGTTGCTGTAAAGAAGATGCTTGATTTGGATTCGAAAAGGGACGAAGAATTCTCCAATGAGGTTGAGATCATTAGCAACATAAAGCACAGGAATCTCCTCCCTCTGCGAGGCTGCTGCGTAACAAGCGATGATTTCAAAGGTAAGCAGAGGCATCTTGTCTATGATTACATGCCCAACGGTAGCCTCGAGGACCATCTCTTTGTCAATGAAGCTAATTACAATAACAAGCAGCAGTTGAGTTGGCCTCAGCGCAAGAACATAATCATAGATGTGACGAAGGGGCTCGCTTACTTGCATTATGGAATCAAGCCTGCCATCTACCACAGAGACATCAAGGCCACCAACATACTCTTGGACTCAGAAATGAAGGCAAGGGTGGCAGATTTCGGACTGGCAAAACAAAGTAGAGAAGACCAGACTCATCTTACCACCAGAGTCGCCGGCACACATGGCTATCTAGCCCCAGAATACGCCCTGTATGGGCAGCTGACAGAAAAGAGTGATGTTTATAGCTTTGGCATCGTAATTCTTGAGATTATGAGTGGGAAGAAGGTGCTTGACACATCATCACCGTCCACGCTGCTTATTACTGATTGGGCTTGGATGCTCGTCAAATCGGGACGTATAGAAGAGGTATTCGACAAGTCAATAAGAGACGTAGGACCAAGAGGGATAATGGAGAGGTTTGTCCTCGTCGGACTTCTATGCGCACATGTCATGGTTGCATTTAGGCCTACCATTGCAAAGGCTCTAAAGATGTTGGAAGGCGACATCGACATACCCACATTACCAGACAGGCCGTTGCCTCTCAGTCACGAGTCCTTTCGATCTTCTCTGCAGTATAGTAATTCATCGAACAACAGATCAAGATCAAGCACGAGTCAAAGATGGATTGGATGA 1866 0.4705 MRTSVFFSSLLYLLSSFSFASVHAASASASACPIDLGYIETFPWDTSLCRDDNQHCCQTLLSLFGMGLSRHLKDTNMFQLPNAVSSSACHVEFQTRLAAMSLQPSLVPMCFNDSTQFIVSPSSCAGIITTQDWVQKVGATTQLDDYCKEELSGLTSCSSCLAAGMKVTSQLVSLDKNATKCFYFTVLYAAGIVSQPGPEDIKTAACILGLPLADSAIKKTSDGPERGRLFKFIFGFIGAFISVVVLLGSVMLYWFWDKRKKRKAAHAEFVGNFKASLRLNTGVTWFRLGDLERATDGFSQRNLIGRGGYGVVYKGTLSDGTTVAVKKMLDLDSKRDEEFSNEVEIISNIKHRNLLPLRGCCVTSDDFKGKQRHLVYDYMPNGSLEDHLFVNEANYNNKQQLSWPQRKNIIIDVTKGLAYLHYGIKPAIYHRDIKATNILLDSEMKARVADFGLAKQSREDQTHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGIVILEIMSGKKVLDTSSPSTLLITDWAWMLVKSGRIEEVFDKSIRDVGPRGIMERFVLVGLLCAHVMVAFRPTIAKALKMLEGDIDIPTLPDRPLPLSHESFRSSLQYSNSSNNRSRSSTSQRWIG* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00570 621 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Eupl03g00570 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Eupl03g00570 621 Pfam SPARK 27 181 IPR043891 -
Eupl03g00570 621 SMART serkin_6 298 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00570 621 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 141 614 - -
Eupl03g00570 621 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 379 584 - -
Eupl03g00570 621 Gene3D Transferase(Phosphotransferase) domain 1 379 582 - -
Eupl03g00570 621 FunFam Receptor-like serine/threonine-protein kinase At4g25390 263 378 - -
Eupl03g00570 621 ProSitePatterns Protein kinases ATP-binding region signature. 304 327 IPR017441 GO:0005524
Eupl03g00570 621 SUPERFAMILY Protein kinase-like (PK-like) 282 604 IPR011009 -
Eupl03g00570 621 Gene3D Phosphorylase Kinase; domain 1 259 378 - -
Eupl03g00570 621 CDD STKc_IRAK 304 578 - -
Eupl03g00570 621 Pfam Protein kinase domain 299 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00570 621 ProSiteProfiles Protein kinase domain profile. 298 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00570 621 MobiDBLite consensus disorder prediction 601 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00570 Eupl-Chr3 23894377 23897369 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00570 25 598 Receptor kinase-like Gene Family AT1G11050 53.209 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Eupl03g00570 Pkinase 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00570 - - nnu:104605877 843.958