Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00569 ATGCAAAGACGAAGGGGAACACCAATCAAGAAGGTTATCTTACAAGAGGTTATAACTTGCAACGCAACATGGGTTATACTTGATAGGCAGCTAAGAAGGGATCTGAAGTTTTACCTCAAACAGATACCTTGCAAGGTTGCTTTATTTCAAGATAGCTTATCTGTGGACGTGCTGAGGTCTTATACAATAAGTGACACAGATGTCTCAGAACAGAAGTTCTTTTACTCTCTTTGCAAGCCCGTTCAGCCCATATTGAATGTGCAAGATAGTGTAAACAATGAGCAGTCTCATATCTTGTGCCAAAGCTACTCTGCTTCTATTAGTTCCCAAGAAAGCTCCGACATCTTCAAGTGCAGTTTGGCATCTTCATCCACAAACAGGTCACAGGGGTACAATTCGTCAGTGTCTGATGAAAGTGGGTGTTCTTCTAAGCAAATGAGATCAGAGAAATATTCCAGAGACAATGAATATCCTACTGGTCCTCAGATTTTCCCAAACCAACAAAAATTTTTAGAAGCACCAGTTCTTTGTACCGGTTGTGGGACAAGGTCTGTACTGTATATCAAGGAGGCCATGAGTTTCAGATTTTCAGATATTCAAGTTGCAACATCTGACTTCTCAAAGGAGAACTTGCTAGGAGAAGGTGGATATGGTCATGTATATAAAGGTCGTCTTAAAGATGGACAGGTTATTGCAGCGAAGGTACGGAATAAAGCAAGTGCACAAGGATATACTGAATTTCGTTCTGAAATATTGGTCCTAAGCTTTGCACGCCACAAGAATATTGTGATGCTGTTAGGTTATTGTAGCAACGAGAACCATAAAATTTTGGTGTATGAGTTTATCTGCAACAAATCTCTCGAGTGGCACTTATTCAGTAAATACGCTACTGTTCTTGAGTGGCACAAAAGACGTGCCATTGCCATTGGAATGGCAAAAGGATTGCGTTTTCTACATGAAGAGTGCCGTGGAGGTCCAATAATTCACCGGGACTTGCGTCCAAGCAACATATTACTCACCCATGACTTCGTTCCAATGCTAGGTGATTTTGGCCTTGCCAAATGGAAAACAACTGACGATGTCATGCATACAAGGGTGCTTGGAACATTAGGATACCTTGCGCCAGAGTATGCAGAGAATGGTACTGTCTCTGTACGAACAGATGTTTATGCATTTGGCATTGTTCTGTTACAACTGATATCTGGACGCAAAGTGGTTGAGACAAGTAGAGAAGAGCAACAGCAATCTCTGCGACAGTGGGCAGAACCACTTATTGAGAAACTTGCCTTACATGAACTCATTGATACTCGTATTGGAGAATCCTATGACACATATGAATTGTACCATATGGCTAGAACAGCATACTTGTGTGTGAGGAGAAGCCCAGAAATGCGGCCATCAATGGCAGAGGTGGTACGCCTTCTTGAAGGGGAGAATGGCCATGTCCGTGACTTGGTGGAACAGTTTATACCTCATTATACAAATTAA 1488 0.4194 MQRRRGTPIKKVILQEVITCNATWVILDRQLRRDLKFYLKQIPCKVALFQDSLSVDVLRSYTISDTDVSEQKFFYSLCKPVQPILNVQDSVNNEQSHILCQSYSASISSQESSDIFKCSLASSSTNRSQGYNSSVSDESGCSSKQMRSEKYSRDNEYPTGPQIFPNQQKFLEAPVLCTGCGTRSVLYIKEAMSFRFSDIQVATSDFSKENLLGEGGYGHVYKGRLKDGQVIAAKVRNKASAQGYTEFRSEILVLSFARHKNIVMLLGYCSNENHKILVYEFICNKSLEWHLFSKYATVLEWHKRRAIAIGMAKGLRFLHEECRGGPIIHRDLRPSNILLTHDFVPMLGDFGLAKWKTTDDVMHTRVLGTLGYLAPEYAENGTVSVRTDVYAFGIVLLQLISGRKVVETSREEQQQSLRQWAEPLIEKLALHELIDTRIGESYDTYELYHMARTAYLCVRRSPEMRPSMAEVVRLLEGENGHVRDLVEQFIPHYTN* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00569 495 SUPERFAMILY Protein kinase-like (PK-like) 191 475 IPR011009 -
Eupl03g00569 495 MobiDBLite consensus disorder prediction 123 142 - -
Eupl03g00569 495 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 283 483 - -
Eupl03g00569 495 ProSitePatterns Protein kinases ATP-binding region signature. 212 234 IPR017441 GO:0005524
Eupl03g00569 495 ProSitePatterns Tyrosine protein kinases specific active-site signature. 327 339 IPR008266 GO:0004672|GO:0006468
Eupl03g00569 495 Gene3D Phosphorylase Kinase; domain 1 179 281 - -
Eupl03g00569 495 Pfam Protein kinase domain 207 472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00569 495 PANTHER OS01G0750732 PROTEIN 36 481 - -
Eupl03g00569 495 SMART tyrkin_6 206 475 IPR020635 GO:0004713|GO:0006468
Eupl03g00569 495 ProSiteProfiles Protein kinase domain profile. 206 490 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00569 495 CDD STKc_IRAK 212 477 - -
Eupl03g00569 495 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 178 281 - -
Eupl03g00569 495 Gene3D Transferase(Phosphotransferase) domain 1 283 487 - -
Eupl03g00569 495 MobiDBLite consensus disorder prediction 123 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00569 Eupl-Chr3 23775288 23887652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00569 178 485 Trihelix Transcription Factor Family AT1G70460 44.089 2.52e-82 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Eupl03g00569 Pkinase 7.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00569 - - pper:18769000 665.611