Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00566 ATGGGAGATGATAATGTCAACCTTCCCCCTGGTTTCCAATTTCATCCGACCGACGAAGAACTAGTCGTTCATTTCCTCTATCGCAAGGCGACGCTCTTACCTTTTTGTCATCCTGATATCATCCCCGATCTCGATCTACATCCGTACGATCCATGGGAACTTAATGGTAAGGCGTTGGCAGGAGGTAAGCAATGGTATTTCTTCAGTCGAAGGACGCCGAATCGAATATCGGCTAATGGGTATTGGATGCCATTGGGTGTTGATGAACCCATTGTCACAAGTGCTAGTAAGAAAGTGGGTTTGAAGAAATATCTTGTATTCTACATCGGCGAAGCTCCGGTCGGGATCAAAACGAATTGGATAATGCATGAATATCGCCTCTCGGATTGCAGTTCTGGTACTATATCCTCCAAAAAAAGAGGAAACCCGAAAATAGATTCAAGTGAGTGGGTTCTGTGCCGAGTCTTGGAGCGAAATGGCGGTTCTCAAGGAAACCTTTGCGACGAGGACGATGACGACGACGACGAAGATGGAACGGAGCTTTCTTGCTTGGATGAAGTTTTCTTGTCATTAGATGATCTTGATGAAATAAGTTGGCCGAATTAG 606 0.4538 MGDDNVNLPPGFQFHPTDEELVVHFLYRKATLLPFCHPDIIPDLDLHPYDPWELNGKALAGGKQWYFFSRRTPNRISANGYWMPLGVDEPIVTSASKKVGLKKYLVFYIGEAPVGIKTNWIMHEYRLSDCSSGTISSKKRGNPKIDSSEWVLCRVLERNGGSQGNLCDEDDDDDDEDGTELSCLDEVFLSLDDLDEISWPN* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00566 201 Pfam No apical meristem (NAM) protein 9 127 IPR003441 GO:0003677|GO:0006355
Eupl03g00566 201 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Eupl03g00566 201 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Eupl03g00566 201 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
Eupl03g00566 201 PANTHER NAC TRANSCRIPTION FACTOR 56 8 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00566 Eupl-Chr3 23703385 23704669 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00566 1 166 NAC Transcription Factor Family AT1G61110 45.946 1.27e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl03g00566 NAM 1.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00566 - - nnu:104606712 326.25