Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00565 ATGACGAAACAAGGTTGTGAGATAGAAGCAATAAACATCAATTACAAGATCTACACAGATAAGAAACAACACCCATTAAAGATCTTCAACAAAGAACACCAACAACAACCAGAAGAAGATGATCAAGAACAAGGCACAGAAACAAAACCAAGCATTCGGAATGTGTTGAAGGACGTATGTTGCAGAGCCAAACCATGGGAGATTCTTGCAATTGTCGGCCCGAGTGGTGCCGGCAAGTCGACGCTCTTAGAAATCCTCGCCGGGAAACTCGTCCCGCAAATGTCGTCCATCTTCATCAACCAAAAGCCCATTGACATGTCCCTCTTCAAGAAAATTTCTGGCTATGTTACTCAGAAGGACACACTCTTCCCTCTTCTCACTGTTGAAGAGACCCTCCTGTTCAGTGCAAAGCTTAGGCTTCAGCTTCCTCCATCTCAATTGAGCTCCAAAGTGAAGGCATTGATCAATGAGTTGGGCCTGGGCCATGTTGCGGAGGCCCGTGTCGGTGACGATAGAGTACGCGGTATCTCCGGCGGTGAGAGACGTCGCGTATCGATCGGCGTCGATGTTGTACATGATCCGAGAGTGTTGATTCTCGATGAACCAACGTCGGGACTCGATAGTACTTCTGCTCTTCAGATCATCGACATGTTGAAGACCATGGCGGAAACAAGGGGTAGGACTATAATTCTTAGTATCCATCAGCCCGGGTTTCGAATTGTCAAGCTGTTCAATTCCATTCTTTTATTGGCTAATGGCTCCGTTTTGCACCACGGAACCGTCGATCAGCTTCAAGGGAATTTGAGGTCCCTAGGACTACAACTCCCTCCTCATGCAAATGTCGTCGAATTCGCCATCGACGCCATCGAAACCCTTCAAGAACAGCAGCAACAACAATTACAACTAGTGCACCATGATCACCCACAACACAAAAGAAGGGATGAAGGTGAGTATAGAAGTGGTAAGTTCACTCTGCAACAGCTCTTTCAACAATCTAAGGTGGTGGATGAAGAAGTCATTAATGTTGGGATTGATCTTCATTGTGGTTTTGCTAATTCTAGATTACGCGAAACCGTTATACTCACACATAGGTTTTCGAAGAACATTTATCGAACGAAGGAGCTCTTCGCGTGCCGAACAATTCAAATGTTGATCGTTGGGCTCGTCTTGGGTTCGATCTTTTACGATCTTAAAGACGATATAGTCGGCGCCGAAGAAAGAGTAGGCCTATTTGCATTTATCTTGACATTTTTGTTATCCTGCACAACAGAAGCTCTTCCTATCTTCTTGCAAGAGAGGGAGATTTTGATGAAGGAGACATCAAGTGGAAGCTATAGGGTCTCATCTTATGTGATCGCAAACGGACTCGTCTTCCTACCGTTTCTGTTCATCCTCGCCGTCTTATTCTCTGTGCCATTGTACTGGCTTGTGGGTCTTAACAGAAGTTTCATGGCTTTTATGTATTTCTTGCTGTTAATCTGGTTGATCTTCTATACGGCGAACTCGATCGTGGTTTGTTTCAGTGCCCTTGTGCCGAATTTCATCGTGGGGAACTCGGTGATATCGGGTGTGATGGGATCGTTCTTTCTGTTCTCTGGGTATTTCATATCAAAGAATGGGATGCCGAATTATTGGATCTTCATGCATTATATATCACTTTTCAAGTATCCCTTTGAAGGGTTTTTGATAAATGAGTTCTCAGGCTCAGGGAAGTGTTTGGATTACATGTTTGGAACCTGTGTTGTGAGTGGAGAAGACATGATTAGGGAAGAAGGATATGGAGAGGAGAGTAGGTGGAGGAATGTTGTGATCATGGTTTGTTTTATCTTGTTTTACAGGTTCATCTCTTATGTCATTCTTAGATGTAGGTGCTCTCAAATGGGTCTCAAGAAAGCTCTACTTTGA 1905 0.443 MTKQGCEIEAININYKIYTDKKQHPLKIFNKEHQQQPEEDDQEQGTETKPSIRNVLKDVCCRAKPWEILAIVGPSGAGKSTLLEILAGKLVPQMSSIFINQKPIDMSLFKKISGYVTQKDTLFPLLTVEETLLFSAKLRLQLPPSQLSSKVKALINELGLGHVAEARVGDDRVRGISGGERRRVSIGVDVVHDPRVLILDEPTSGLDSTSALQIIDMLKTMAETRGRTIILSIHQPGFRIVKLFNSILLLANGSVLHHGTVDQLQGNLRSLGLQLPPHANVVEFAIDAIETLQEQQQQQLQLVHHDHPQHKRRDEGEYRSGKFTLQQLFQQSKVVDEEVINVGIDLHCGFANSRLRETVILTHRFSKNIYRTKELFACRTIQMLIVGLVLGSIFYDLKDDIVGAEERVGLFAFILTFLLSCTTEALPIFLQEREILMKETSSGSYRVSSYVIANGLVFLPFLFILAVLFSVPLYWLVGLNRSFMAFMYFLLLIWLIFYTANSIVVCFSALVPNFIVGNSVISGVMGSFFLFSGYFISKNGMPNYWIFMHYISLFKYPFEGFLINEFSGSGKCLDYMFGTCVVSGEDMIREEGYGEESRWRNVVIMVCFILFYRFISYVILRCRCSQMGLKKALL* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00565 634 Gene3D - 43 317 IPR027417 -
Eupl03g00565 634 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 615 - -
Eupl03g00565 634 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524|GO:0016887
Eupl03g00565 634 Pfam ABC-2 type transporter 358 566 IPR013525 GO:0016020|GO:0140359
Eupl03g00565 634 Pfam ABC-2 type transporter 234 299 IPR043926 GO:0140359
Eupl03g00565 634 FunFam ABC transporter G family member 5 40 301 - -
Eupl03g00565 634 Pfam ABC transporter 56 204 IPR003439 GO:0005524
Eupl03g00565 634 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 277 IPR003439 GO:0005524
Eupl03g00565 634 SMART AAA_5 65 390 IPR003593 GO:0016887
Eupl03g00565 634 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 273 IPR027417 -
Eupl03g00565 634 Pfam CDR ABC transporter 578 620 IPR010929 GO:0005524|GO:0016020|GO:0042626|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00565 Eupl-Chr3 23684908 23687151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00565 48 282 Calmodulin-binding Proteins AT2G36910 26.423 5.08e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00565 K05681 - nnu:104606709 1021.54