Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00530 ATGGTCAGACGGATATGCTCCCATGAGCTTCGACATACATGCTCCCGAGAGCTCTTCCAGACATCCTCCATAGAGTCCAGACTCACATCAAATGGCATCTACTTTTTGGTCTTCTCGGAGGCGGACCATCTCCCACCGTCGAGCTCCACAACCGAGAGGGGACTATTTTCCAATCCCAACCATGGTGCACGTAAGCTTAGAAAAGCTGGACAAAGCCGGTGGTTAGGCAGACGCCCCATTGTTCGTGGTGTTGCAATGAATCCAGTGGATCATCCTCATGGAGGAGGTGAGGGGCGCACGAAAGGAGGTAGACCTTCGGTGTCACCTTGGGGGAAGCCCACCAAAGCTGGATTTCGGGCAGGGGTGGGGAAACGCAGAAATTAG 384 0.5391 MVRRICSHELRHTCSRELFQTSSIESRLTSNGIYFLVFSEADHLPPSSSTTERGLFSNPNHGARKLRKAGQSRWLGRRPIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGVGKRRN* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00530 127 SUPERFAMILY Translation proteins SH3-like domain 47 116 IPR008991 -
Eupl03g00530 127 Gene3D Ribosomal protein L2, domain 3 57 127 IPR014726 -
Eupl03g00530 127 SMART Ribosomal_L2_C_2 22 113 IPR022669 GO:0003735|GO:0005840|GO:0006412
Eupl03g00530 127 FunFam 60S ribosomal protein L2, mitochondrial 57 123 - -
Eupl03g00530 127 MobiDBLite consensus disorder prediction 45 127 - -
Eupl03g00530 127 PANTHER RIBOSOMAL PROTEIN L2 47 126 IPR002171 GO:0003735|GO:0005840|GO:0006412
Eupl03g00530 127 ProSitePatterns Ribosomal protein L2 signature. 79 90 IPR022671 GO:0003735|GO:0005840|GO:0006412
Eupl03g00530 127 Pfam Ribosomal Proteins L2, C-terminal domain 49 111 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00530 5 96 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 33.010 3.56e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00530 - - ming:122082202 142.895