Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00514 ATGAAGAAGATGATGACAACCAGGCCGTCCAGTAATGAAGATGAAGAAGAAGCAGCAAAAAGTGGTGGTGGTGGTGATGGTGATGGAGTTGGTCGGACGGTAGTAGTGGGAGTGAAGATGGATTCACAAAGTAGAGAGTTGCTAACATGGGCTCTTGTTAAAGTTGCTCAACCTGGAGATACAGTCATTGCTCTTCATGTTCTTAGCAACTCTGAGGTTATCGATCGAGGCGGTCAATCTTCACTCTTATCACTCGTCAAAGCTTTTGATTCTGTTCTTGCAGTTTACGAAGGTTTCTGCAACTTGAAACAGGTTGATCTCAAGCTTAAGATCTGTCGAGGCTCGTCGATCCGAAAAGTACTGGTACGAGAGGCGAAATCTTATGTTGCTGGTAAGGTTATTGTTGGTACTGCTAGGAATCACCATGCGATTAGGTCGTCGACTTCGGTTGCTAAGTACTGTGCGAGAAAACTCGAGAAAGATTGTTGGGTGCTTGCTGTTAATAATGGCAAAGTCGTGTTTCAGAGAGAAGCAACTACGGTGGCCAACAGTGGCTCAAAAGGAGCCGATTCTTCGCGAAAAAAATTGATTGGCACGATTCACCGGTCATTGAGTAAGAATTCTAAAGTACTAAATGATGCCATCGCCGCTGCGGTGGCGGCATCTAATCAGGAAGATCACCGGGACATCGGTGCCGACTTACTGAAAGCAGAGTCAAATTGTTCCCGGGCTTCCCTCAAACAGAATTGTCCAATTTGTAAACCGTTCTCTGTTTTGCTGGGTACCCATTGTAATCAACCGGTGGAAGAGTCCTCTAGTGATGAAGTTGAAGACAATTCGTTGGCTTTAGTACCCATACAGACTCTAGAGGCGGCGTCGAGCTCGATCTCCCTCTTGATTCGAGAATTGCCTGAATTGAGACCCGGTTGGCCACTTCTTCGCCGGGCAATCTTACGCAACCCAAAAGTCTCGGAGAGATCTGGAGTGAAGGAGATTTCTGTCGTTCAATGGGCAATGCGGTTGCCAAGCCACCCTTCATCGGTTACTGTCCACCCTGATCAGCAACAGAGTAATTGTGATTGGAATGAAGAACATTCTTCCACATTGGATGGAGAGAGCGGTGCGATTGTTCTAGTAGGGACTGACCCTTGTTCTTCTCACTCGTCCCCCGACCATGGATCAGATAGCCTTCCCAAAGAATTGGAGTCTCTCCATGAGAAATACTCGTCCACCTGCAGATTGTTCGGGTACCAGGAACTTCTGTCTGCAACATCTAACTTCATGCCTGAGAAATTGATTGGGAAGGGAGGGAGTAGTCAGGTTTACAAAGGATGTCTTCCTGATGGTAAGGAACTGGCAGTGAAGATCTTGAAGCCATCTGAAGATGCTGTGAAGGAGTTTGTTTTGGAAATTGAGATCATCACTGCCTTGCATCACAAGAACATCATCTCCCTCTTTGGGTTCTGCTTCGAGTGCAACAATCTTCTCTTGGTTTACGATTTCCTATCAAGGGGAAGCCTTGAAGAGAATCTTCATGGTAATAAGACGGACAAGCTCGCATTTGGTTGGGGAGAGAGATATAAGGTGGCTGTGGGTGTCGCCGAGGCATTAGATTATCTACACAGCAGCAGTACTCAACCAGTGATCCATAGGGATGTGAAATCATCGAATATCCTTCTCTCCGATGATTTCGAACCACAGCTATCAGATTTTGGGCTTGCTAAGTGGGCTTCAACCTCTGCATCGCATATAACGTTCACTGATGTTGCAGGAACTTTCGGATATTTGGCTCCTGAATACTTCATGTATGGCAAGGTAAATGACAAGATTGATGTCTACGCATTCGGCGTCGTACTCCTTGAGCTTCTTTCAGGAAGGAAGCCCATCAGCAGCGAGTATCCAAAGGGCCAGGAAAGCCTGGTCATGTGGGCAAAGCCAATTCTAAATGGTGGGAAGGTTGTACAATTGTTGGATCCAAGTTTGGGCAATAATTATGACAGTGAACAGATGGAGAGGGTGGTTCTAGCTGCTACCCTCTGTATCAGACATTCACCTCGATCTCGGCCTCGTACGAGCCTCATCGTGAAGCTCCTCCAAGGTGATGCTGAGGTAACCAAGTGGTCCAGGCTACAAGTTAGTGCTAGAGAGGAGTTTGACGGGTTGGACGATGAAACATTTCCACCTCCTAACCTCCAGTCCCATCTTAACGTTGCGTTGCTTGATGTGGAGGACGATTCACTCTCCGTCAGCAGCATTGAGCAGAGCGTATCATTGGAGGATTATTTGCAGGGGAGATGGAGCCGCTCATCAAGTTTCGACTAA 2322 0.4699 MKKMMTTRPSSNEDEEEAAKSGGGGDGDGVGRTVVVGVKMDSQSRELLTWALVKVAQPGDTVIALHVLSNSEVIDRGGQSSLLSLVKAFDSVLAVYEGFCNLKQVDLKLKICRGSSIRKVLVREAKSYVAGKVIVGTARNHHAIRSSTSVAKYCARKLEKDCWVLAVNNGKVVFQREATTVANSGSKGADSSRKKLIGTIHRSLSKNSKVLNDAIAAAVAASNQEDHRDIGADLLKAESNCSRASLKQNCPICKPFSVLLGTHCNQPVEESSSDEVEDNSLALVPIQTLEAASSSISLLIRELPELRPGWPLLRRAILRNPKVSERSGVKEISVVQWAMRLPSHPSSVTVHPDQQQSNCDWNEEHSSTLDGESGAIVLVGTDPCSSHSSPDHGSDSLPKELESLHEKYSSTCRLFGYQELLSATSNFMPEKLIGKGGSSQVYKGCLPDGKELAVKILKPSEDAVKEFVLEIEIITALHHKNIISLFGFCFECNNLLLVYDFLSRGSLEENLHGNKTDKLAFGWGERYKVAVGVAEALDYLHSSSTQPVIHRDVKSSNILLSDDFEPQLSDFGLAKWASTSASHITFTDVAGTFGYLAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISSEYPKGQESLVMWAKPILNGGKVVQLLDPSLGNNYDSEQMERVVLAATLCIRHSPRSRPRTSLIVKLLQGDAEVTKWSRLQVSAREEFDGLDDETFPPPNLQSHLNVALLDVEDDSLSVSSIEQSVSLEDYLQGRWSRSSSFD* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00514 773 Gene3D HUPs 31 169 IPR014729 -
Eupl03g00514 773 ProSiteProfiles Protein kinase domain profile. 427 704 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00514 773 Pfam Protein kinase domain 430 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00514 773 Gene3D Phosphorylase Kinase; domain 1 394 501 - -
Eupl03g00514 773 MobiDBLite consensus disorder prediction 380 399 - -
Eupl03g00514 773 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 396 501 - -
Eupl03g00514 773 FunFam Putative receptor-like serine/threonine-protein kinase 502 714 - -
Eupl03g00514 773 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 31 168 - -
Eupl03g00514 773 PANTHER OS08G0249100 PROTEIN 88 720 IPR046958 -
Eupl03g00514 773 SMART serkin_6 427 718 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00514 773 CDD USP_Like 41 164 - -
Eupl03g00514 773 MobiDBLite consensus disorder prediction 345 364 - -
Eupl03g00514 773 ProSitePatterns Protein kinases ATP-binding region signature. 433 455 IPR017441 GO:0005524
Eupl03g00514 773 Pfam Universal stress protein family 32 164 IPR006016 -
Eupl03g00514 773 MobiDBLite consensus disorder prediction 345 365 - -
Eupl03g00514 773 MobiDBLite consensus disorder prediction 1 22 - -
Eupl03g00514 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 548 560 IPR008271 GO:0004672|GO:0006468
Eupl03g00514 773 SUPERFAMILY Protein kinase-like (PK-like) 408 698 IPR011009 -
Eupl03g00514 773 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 32 164 - -
Eupl03g00514 773 Gene3D Transferase(Phosphotransferase) domain 1 502 716 - -
Eupl03g00514 773 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00514 Eupl-Chr3 21982402 21986249 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00514 414 690 Trihelix Transcription Factor Family AT1G68690 46.809 2.03e-77 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Eupl03g00514 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00514 - - nnu:104606678 1042.72