Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00513 ATGCAGCTATACCATCATCCATACTCCTTGGACAGCCAGAAGGTCAGGCTTGCGTTGGAAGAGAAAGGCATAGATTACACTTCATACCACGTTAATCCACTCATGGGCAAGAACATGGATTCCTCGTTCTTCCGCATGAACACGACTGCAAAACTGCCTGTTTTCCAGAATGGTGCTCACATCATCTTCGATACTATTGAGATAATCCAGTACATAGAAAGAATCACAATAGTCTCTTCAGGTGTTGAAAGTGATACCATTAATGGCAGAGAAGTTAACAAATGGATGCAGAAGATACAAGGATGGAACCCCAAGTTATTCACGCTCTCCCACATCCCTGAAAAGTACCGGCTCTTTGTTTCCAAATTCATGAGGCGGGTGGTGATTGCTCGGATGGCCGAGTCACCAGATTTAGCGAGTGTCTACCACATGAAGCTAAAAGATGCGTATGAGACAGAAGACAAATTAAAAAACCCGGATGTTTTGAAACAGAGTGAGCAACAACTAGTCCGACTTCTCGATGAAGTGGAGATGCAACTAAGTGAGACAGCCTATCTGGCAGGAGAACAGTTCACCATGGCAGATGTCATGTTCATGCCTGTGCTGGCGCGCATAGTGCTCCTGGATTTGGAAGATGAGTACATAGGTAGCAGGCCCAAAATTGCTGAGTACTGGAAGGTGGTCAAGCAGAGGCCTAGTTATAAAACAGTGATAGGGAAGTATTTCTCCGGATGGAGAAAATACAGAACACTGTTAAAGACCTGGTGTTCTGTTTGCTTCAGAAGTGTACTCAAGAGATACTGA 804 0.4465 MQLYHHPYSLDSQKVRLALEEKGIDYTSYHVNPLMGKNMDSSFFRMNTTAKLPVFQNGAHIIFDTIEIIQYIERITIVSSGVESDTINGREVNKWMQKIQGWNPKLFTLSHIPEKYRLFVSKFMRRVVIARMAESPDLASVYHMKLKDAYETEDKLKNPDVLKQSEQQLVRLLDEVEMQLSETAYLAGEQFTMADVMFMPVLARIVLLDLEDEYIGSRPKIAEYWKVVKQRPSYKTVIGKYFSGWRKYRTLLKTWCSVCFRSVLKRY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00513 267 CDD GST_N_family 1 73 - -
Eupl03g00513 267 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Eupl03g00513 267 CDD GST_C_family 149 226 - -
Eupl03g00513 267 SFLD Main (cytGST) 1 231 - -
Eupl03g00513 267 Coils Coil 162 182 - -
Eupl03g00513 267 Gene3D Glutaredoxin 1 75 - -
Eupl03g00513 267 SFLD Glutathione Transferase (cytosolic) 1 231 IPR040079 -
Eupl03g00513 267 Pfam Glutathione S-transferase, C-terminal domain 161 210 - -
Eupl03g00513 267 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
Eupl03g00513 267 SUPERFAMILY GST C-terminal domain-like 139 241 IPR036282 -
Eupl03g00513 267 Gene3D - 116 238 - -
Eupl03g00513 267 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Eupl03g00513 267 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 113 251 IPR010987 -
Eupl03g00513 267 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 267 IPR044617 GO:0004364
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00513 Eupl-Chr3 21959694 21965213 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00513 1 267 Glutathione S-transferase Gene Family AT1G77290 69.663 5.68e-142 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00513 K22077 - psom:113346430 448.358