Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00503 ATGAAGATGATAACGAACTCGTTCAAGGGCGCGAACGTGTTCCTCTCTCGGAACCTAGTTCCTCCTGAAATCTTCGACGCCGTTCACGACGCTCTCAAACAGAACGGAGCCGAGGTTTTTCTCTGCTGCGATCCCTCACGATCCGCTACCAACGATTACCATGTCATCTCCTCCCTCGACCACGAGAAATTTGACGATCTCAAAGCCAAAGGCTGTAATTTGCTCGGTCCTCAATGTGTACTTTCTTGTGCGAAAGAAAATAGAGTTTTGCCTAAGCAGCAAGGTTTCACTTGTTGCCTTGCAATGGATGGGGTTAAAGTACTTGCATCCGGTTTTGAAAAGGATGAAAAGGTAAAGATTGAAAAGTTAGTGACTGCAATGGGAGGAGTGGTTCAAACTAGGGCATCGCTCGATGTTAGCTTTGTTATTGTGAAGAACGTTTTGGCTGCAAAGTACAAGTGGGCTTCAAGCGTCCTGAAGAAACCAATTGTCACCATTCGCTGGTTACATCAATGCTGGAAAGAACACCGTGTTGTGCCTCAGGAACCATATAGGGTCCTTCCTTTTTCTGGATTGACTATCTGCGCTACTAGAATTTCAGCAGATGTGCGGAAGGAGATGGAAAAGCTTATCATACAGAATGGTGGACAATATTCTGCTGATCTGACCAAGAAGTGTACACATTTAGTTTCTGATGCTCCTGAAGGTGACAAATACAAAGTCGCCCGAAAATGGGGTCACATTCACATTGTTACTCAAAAATGGCTCGATCAATCTGTTACTAGAAGAGCCTGTCTAGACGAGGAGTCCTATCCAGTTCATGGGGCTTCTATTTCTTCAAGCAGTATTGTAAAGGTTGGTTTGAAGGGACAGCATAGCCAAGATAAGGGTAACACAAATTCGCAATCTGTTCCATCCTCAATGATTGCAGATCTAGAAACAACCCTGTCCCAGAACATGTCTTCTACAGTGTCTGAGTCCACTATCTTCACCAAAGATGAGGGTACTGAAGCACCTACCTTGCAGCCTGGAGATGAGACAAAGTTTGATGGTTGTGTTGCTGATGATTCTCAAACGGAAGATAGCGATTTATACTTGTCAGATTGCAGAATTTTACTTGTTGGATTTCAGGCTAGTGAAATGCGTAAACTAGTCAATATGGTGCGTAAAGGTGGGGGTTCTCGGTATATGTCATTCAGTGAAAAGCTGACACACATTGTCGTGGGATCACCTTCAGAGAATGAAAAAAAGGAGGTAAGGAGGCATGCAGCTTTGGGTGTCATTTATGTGGTTAGAACTATCTGGCTGGAAGATTGTGATCGAGAAAGGAAAGAAATTCCTGTGTCGCAAAGGCACCTGGTTTCTGATTTGCTTCTTCCGAAAGATCCTGTATGCTACAATAAAGCAGCAGTTACAGGCATTTCTGCTATAAAGCAAGGGAAAAGTTCCATTGCCCCTTCCAGCATGCCAACTGATCAGATAATGACGGATATGCCCTTTGAAACTGGGATGTCACTGGAGAAAGGTAGAGAAGGAAAACTGGGAACAAATCTGGTAGGAGGAAGCTCTGTGGAAGCAGCTGCAAAATCTGTCCAGCAGAACCTGTTTTATTCTGTAAATGATGAGCGTAAGGGTCAACAAAAATCACAATGTGATTCTGACATTATGGATGCTGAAGATGGAAGATCACCAAATATTTTCAAGGGGCTGCTCTTTCGCTTTTCAAGATCTTTTCCTGAAGATCGGAGAGCTGAAATTGTTGAATGGGTTAACCAAGGTGGAGGAGCTATAGTGGATGATCAGAGTAAGCATAATGTGCACTTCACCATTGAGTGTCATGGTTTTATGCAGAGGCCTGCTGATGTTTCTCAGACTACTATTGTTTCTAGTCACTGGATTAGGACTTGTTTAGAGGACGGCTGCATGCCAGATGTTGGCAGTCACATTATCTACTCCCCACTTCCCTGCCGGATTCCTTTACCTGGGTTCGAAGGCTTTCGGTTCTGTGTCTCCCAGTATGAAGAGAAAGATAGGCTGTTATTAAGAAATCTGTGCTTTGTTCTGGGAGCTAAATTCACTGAAAAATTGAGTAAAAAGGTCACCCATTTACTATGCAAGTTCACTAGTGGCCCAAAGTACGAGGCTGCATGTAAATGGGGGATACAGTCAGTTACTTCTGAGTGGATTTCTGAATGCATCAGGCGGGATAAAATTGTTTCTCTGGATCCATTTCGGCCAAAAGAAGTTACTGCTCATGACCGAGAGGCAGGATTATGCACAGTGAGCCAGTATCCTACACAAGCAGCTCGGATGGCATCTGGGGATGTTCCATCTCAGTTACCAAGTCAATCCCAAGTCTTGACTAAAATACAAACTGAAATTATTGGTAATAGAAGTCACGAATTCAGTCACGAGGAAAAACATTCATGTGCTTATAGTAAAAGGTCAAGGCTTTCGGATGATGGCGGACACAGGGATTTACTCCCTGCAGAAGTTTGTGAAGATCTTTCTACCTGCAAGATGGATTCCATGAGAAATGGCATATCAGAAGATGTTGTGGAAATTTCACGTGCTGTTCCTGATGTAGCCGCAGCTATTGAGGACTTGTTAGCACAATCAGATAAGATTCAAGTCATGACATCACCTGGAAGGATTGGGTCTGATCGAAGTATTTTCTCACCTGATCGTTCGTTTCTTGGTCAAGATCATGCAGATTCTCGTTCTGCCTTCGGGATTTCTAAACATTGGTCAAGCAGGACCGAGAAACAAGATGATCTGTGCAATCCCTCTGGACAAGCGGTAAACCAAATCACTTATGATGGTTTCAGTGAAACACAAACGGAGTCCCAGGTTGTTGGGTATGAAGAAGATCTATCAGGCATACAGATGATAATTGACAGAGTTCGGACACGAAGTAGCTTGACTTGA 2928 0.4368 MKMITNSFKGANVFLSRNLVPPEIFDAVHDALKQNGAEVFLCCDPSRSATNDYHVISSLDHEKFDDLKAKGCNLLGPQCVLSCAKENRVLPKQQGFTCCLAMDGVKVLASGFEKDEKVKIEKLVTAMGGVVQTRASLDVSFVIVKNVLAAKYKWASSVLKKPIVTIRWLHQCWKEHRVVPQEPYRVLPFSGLTICATRISADVRKEMEKLIIQNGGQYSADLTKKCTHLVSDAPEGDKYKVARKWGHIHIVTQKWLDQSVTRRACLDEESYPVHGASISSSSIVKVGLKGQHSQDKGNTNSQSVPSSMIADLETTLSQNMSSTVSESTIFTKDEGTEAPTLQPGDETKFDGCVADDSQTEDSDLYLSDCRILLVGFQASEMRKLVNMVRKGGGSRYMSFSEKLTHIVVGSPSENEKKEVRRHAALGVIYVVRTIWLEDCDRERKEIPVSQRHLVSDLLLPKDPVCYNKAAVTGISAIKQGKSSIAPSSMPTDQIMTDMPFETGMSLEKGREGKLGTNLVGGSSVEAAAKSVQQNLFYSVNDERKGQQKSQCDSDIMDAEDGRSPNIFKGLLFRFSRSFPEDRRAEIVEWVNQGGGAIVDDQSKHNVHFTIECHGFMQRPADVSQTTIVSSHWIRTCLEDGCMPDVGSHIIYSPLPCRIPLPGFEGFRFCVSQYEEKDRLLLRNLCFVLGAKFTEKLSKKVTHLLCKFTSGPKYEAACKWGIQSVTSEWISECIRRDKIVSLDPFRPKEVTAHDREAGLCTVSQYPTQAARMASGDVPSQLPSQSQVLTKIQTEIIGNRSHEFSHEEKHSCAYSKRSRLSDDGGHRDLLPAEVCEDLSTCKMDSMRNGISEDVVEISRAVPDVAAAIEDLLAQSDKIQVMTSPGRIGSDRSIFSPDRSFLGQDHADSRSAFGISKHWSSRTEKQDDLCNPSGQAVNQITYDGFSETQTESQVVGYEEDLSGIQMIIDRVRTRSSLT* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00503 975 PANTHER DNA REPLICATION REGULATOR DPB11-RELATED 3 973 - -
Eupl03g00503 975 Gene3D BRCT domain 188 274 IPR036420 -
Eupl03g00503 975 FunFam Transcription coactivator 99 187 - -
Eupl03g00503 975 CDD BRCT 105 172 - -
Eupl03g00503 975 CDD BRCT_TopBP1_rpt2_like 661 735 - -
Eupl03g00503 975 ProSiteProfiles BRCT domain profile. 184 273 IPR001357 -
Eupl03g00503 975 SUPERFAMILY BRCT domain 564 652 IPR036420 -
Eupl03g00503 975 SMART BRCT_7 186 263 IPR001357 -
Eupl03g00503 975 SMART BRCT_7 5 87 IPR001357 -
Eupl03g00503 975 SMART BRCT_7 363 443 IPR001357 -
Eupl03g00503 975 SMART BRCT_7 660 736 IPR001357 -
Eupl03g00503 975 SMART BRCT_7 564 640 IPR001357 -
Eupl03g00503 975 SMART BRCT_7 99 176 IPR001357 -
Eupl03g00503 975 Pfam BRCT domain, a BRCA1 C-terminus domain 564 644 IPR001357 -
Eupl03g00503 975 FunFam Transcription coactivator 559 656 - -
Eupl03g00503 975 ProSiteProfiles BRCT domain profile. 663 746 IPR001357 -
Eupl03g00503 975 ProSiteProfiles BRCT domain profile. 562 650 IPR001357 -
Eupl03g00503 975 SUPERFAMILY BRCT domain 188 274 IPR036420 -
Eupl03g00503 975 ProSiteProfiles BRCT domain profile. 102 186 IPR001357 -
Eupl03g00503 975 SUPERFAMILY BRCT domain 356 450 IPR036420 -
Eupl03g00503 975 FunFam Transcription coactivator 344 453 - -
Eupl03g00503 975 CDD BRCT_TopBP1_rpt3 360 444 - -
Eupl03g00503 975 Pfam BRCA1 C Terminus (BRCT) domain 364 439 IPR001357 -
Eupl03g00503 975 Gene3D BRCT domain 350 452 IPR036420 -
Eupl03g00503 975 Gene3D BRCT domain 658 748 IPR036420 -
Eupl03g00503 975 Pfam twin BRCT domain 106 168 IPR001357 -
Eupl03g00503 975 Pfam twin BRCT domain 192 255 IPR001357 -
Eupl03g00503 975 Pfam twin BRCT domain 667 728 IPR001357 -
Eupl03g00503 975 CDD BRCT_TopBP1_rpt2_like 188 263 - -
Eupl03g00503 975 ProSiteProfiles BRCT domain profile. 361 453 IPR001357 -
Eupl03g00503 975 SUPERFAMILY BRCT domain 59 186 IPR036420 -
Eupl03g00503 975 Gene3D BRCT domain 100 187 IPR036420 -
Eupl03g00503 975 FunFam DNA topoisomerase II binding protein 1 189 280 - -
Eupl03g00503 975 Gene3D BRCT domain 560 656 IPR036420 -
Eupl03g00503 975 SUPERFAMILY BRCT domain 624 747 IPR036420 -
Eupl03g00503 975 Gene3D BRCT domain 33 95 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00503 5 975 Core DNA Replication Machinery Family AT1G77320 51.663 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00503 K10728 - msin:131242662 1391.71