Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00499 ATGTGGAGAAGAGGAAAGAGAAAGGAAGACTGTGCAGATTCCGACGGGGGAGCGCCGCCCAAGAAATACGCCAAGAACGACGACGACTCAGACGACATCATCGTCTGCGAGATTTCGAAGAATAGGAGGGTTTCTGTGAGGAACTGGAACGGGAAGATTGTGGTGGACATTCGGGAGTTTTACGTCAAAGATGGCCAGCAACTCCCCGGCAAGAAAGGTATCCAGCTAACCATTGATCAGTGGAATATACTTCGGGATCATGTGGATGAAATTGACAATGCAGTGGCCGAGAATTCTTAG 300 0.4933 MWRRGKRKEDCADSDGGAPPKKYAKNDDDSDDIIVCEISKNRRVSVRNWNGKIVVDIREFYVKDGQQLPGKKGIQLTIDQWNILRDHVDEIDNAVAENS* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00499 99 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 25 98 IPR045125 GO:0003713|GO:0060261
Eupl03g00499 99 Gene3D Transcriptional Coactivator Pc4; Chain A 24 99 IPR009044 GO:0003677|GO:0006355
Eupl03g00499 99 MobiDBLite consensus disorder prediction 1 28 - -
Eupl03g00499 99 FunFam Putative transcriptional co-activator 26 99 - -
Eupl03g00499 99 Pfam Transcriptional Coactivator p15 (PC4) 36 87 IPR003173 GO:0003677|GO:0006355
Eupl03g00499 99 SUPERFAMILY ssDNA-binding transcriptional regulator domain 35 96 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00499 Eupl-Chr3 21504345 21528796 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Eupl03g00499 PC4 4.5e-25 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00499 K25815 - csin:114256948 154.836