Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00486 ATGAGTATTTTGTTTTTTATGGTGTTACCAGCTATGTTTCGTTCATTTGTATCTGTGAGTTCAGTTACCCCCACAACCAACATCTCTTCATGTCCCATGGATCTGGGGTACGTCCTAGAACTCCCATGGGACACCTCAGAATGCCAAAACTACCAGGAAGGCACCACCAATCACTGCTGCCAGACCCTTCTCAGCCTCTATGGCATTGGTCTCGCCCAACGCTTGAAAGAGACCTCCCTTTTCCATCTCCCCGACCTCCCCACCGCCAACACCTGTGTCGTCGACTTCCAGTCCAAGCTCAATTCCCTCTCTCTTCCTCCCAATATCACCTCTGTCTGCTTTGTTAGTCCCACCCGGTTCGTCATTGAACCTCAATTCTGCGCTGGTATCCAGTCCAAGCTAGACTGGATCAACAAGCTCGGACCTTCCACTTGGCTCGATTCTTCCTGTCAATCTGACCTCTCCGACCTTACGTCGTGTGATGCCTGTCTTAATGCTGGGCTCAAGGTGCAGTCCCAATTGATTTCTATCGATGGCAATACTTCCCATGCTACCAACTGCTTCTACTTTACAGTTCTCTACGCTGTCGGTGTTGTTAACAAGTTTGGTCCAGAGAATACCAGCACTGCTGCCTGTATATTGGGGCTTCCAATAGCCACCCCATCAAGTTCCAAGAGTAAAAGCCACCTTGCTCTTGTTTTCGCATCGACCGGTACTGGAGTGGCTGTTATACTTATTTCCTGTTTGTTGGGCTTGTATTTCTGGTGGGATCGGTGTCAAAAGAAATTGGCTGTCAGGTTTGTGGATTTGGAGGAGCAGAGCTTTAAGCCTCGGTTGAGACCCAATACTGGCTCAATCTGGTTCAAAATTGAGGACCTTGATAAGGCCACTGATGATTTCTCACAGAAGAATTTAATTGGGCATGGAGGTTTCGGAGTTGTGTACAAGGGAATTCTATCTGATGGATCTGTGGTCGCAGTGAAGAGGATCATAGAATCTAAATTTCAAGGTGACGCGGAATTCTGCAATGAAGTGGAGATCATTAGCAACTTGAAACACCGGAATCTCGTTCCACTGAGAGGCTGCTGTGCAACTGATGATGTTGAACAAGAAAAGCAATGGTATCTTGTCTACGATTACATGCCGAATGGGAACCTCAACGATCACCTTTTCTTCACTGGCAACAACAGGAAACCACTGAATTGGCCTCAACGGAAGAGCATAATCTTGGATGTAGCAAAGGGGCTTGCCTATCTTCACTATGGAGTGAAACCAGCAATCTATCACAGAGATATCAAGGCTACAAACATACTCCTGGATGCAGAAATGAAGGCAAGAGTAGCGGATTTTGGACTGGCCAAGCAGAGCAGAGAAGGGCAGTCTCATCTCACCACTAGAGTTGCAGGCACACATGGCTACTTGGCCCCGGAGTATGCCCTCTATGGGCAGCTGACTGAGAAGAGCGATGTTTACAGCTTCGGGGTAGTTGTTCTAGAGATAATGAGTGGGAGAAGAGCACTTGACTTGTCCTCGCAATCACCACGAGCATTCCTGCTTACTGACTGGGCATGGACGCTCGTGAAATCAGGGCGGATCGAAGAGGTTCTGGATGCATCACTACTGAAAGAAGGGGATCCCAACAATTCCAATCCTAAAGTAATCATGGAGAGATTCATCCTGGTCGGGATCTTTTGTGCTCATGTAATGGTGGCTTTGAGGCCAACTATCTTGGATACCCTGAGGATGTTGGAGGGAGACATCGAGGTTCCTCCCATTCCGGATCGGCCAATTCCCCTTAGCCACCGATCAGCTTACAGCAACAGAAACACTTTCAGCATATCTCCATCCTTGAGTATCCCCCAAATAAATGCAGAAGGCATACTAGGGTGA 1890 0.4788 MSILFFMVLPAMFRSFVSVSSVTPTTNISSCPMDLGYVLELPWDTSECQNYQEGTTNHCCQTLLSLYGIGLAQRLKETSLFHLPDLPTANTCVVDFQSKLNSLSLPPNITSVCFVSPTRFVIEPQFCAGIQSKLDWINKLGPSTWLDSSCQSDLSDLTSCDACLNAGLKVQSQLISIDGNTSHATNCFYFTVLYAVGVVNKFGPENTSTAACILGLPIATPSSSKSKSHLALVFASTGTGVAVILISCLLGLYFWWDRCQKKLAVRFVDLEEQSFKPRLRPNTGSIWFKIEDLDKATDDFSQKNLIGHGGFGVVYKGILSDGSVVAVKRIIESKFQGDAEFCNEVEIISNLKHRNLVPLRGCCATDDVEQEKQWYLVYDYMPNGNLNDHLFFTGNNRKPLNWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKATNILLDAEMKARVADFGLAKQSREGQSHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVVLEIMSGRRALDLSSQSPRAFLLTDWAWTLVKSGRIEEVLDASLLKEGDPNNSNPKVIMERFILVGIFCAHVMVALRPTILDTLRMLEGDIEVPPIPDRPIPLSHRSAYSNRNTFSISPSLSIPQINAEGILG* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00486 629 SUPERFAMILY Protein kinase-like (PK-like) 281 584 IPR011009 -
Eupl03g00486 629 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 149 601 - -
Eupl03g00486 629 Gene3D Transferase(Phosphotransferase) domain 1 381 589 - -
Eupl03g00486 629 ProSiteProfiles Protein kinase domain profile. 300 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00486 629 Pfam Protein kinase domain 301 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00486 629 Pfam SPARK 28 188 IPR043891 -
Eupl03g00486 629 FunFam Receptor-like serine/threonine-protein kinase At4g25390 265 380 - -
Eupl03g00486 629 Gene3D Phosphorylase Kinase; domain 1 266 380 - -
Eupl03g00486 629 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Eupl03g00486 629 CDD STKc_IRAK 306 585 - -
Eupl03g00486 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Eupl03g00486 629 SMART serkin_6 300 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00486 629 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 381 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00486 Eupl-Chr3 21067491 21069380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00486 30 628 Receptor kinase-like Gene Family AT1G11050 64.073 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Eupl03g00486 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00486 - - nnu:104606662 866.685