Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00484 ATGAGGACGTCTCTCTTCTTCTCCTCTCTCCTCTACCTCCTCTCCTCCTTCTCCTTTGCATCTGTTCATGCTGCCTCTGCTTCTACTTCTACTTCTGCTTGCCCGATCGATCTCGGCTACGTCGAAACCTTCCCATGGGACACGTCGTTGTGCCGAGACAACAACCAACACTGTTGCCAGACTCTACTTAGTCTCTTCGGTATGGGACTTTCTCGGCACCTCAAGGACACTAACATGTTCCAACTACCCAATGCAGTTTCTTCGTCCGCTTGCCACGTCGAATTCCAAACTAGGCTTGCAGCGATGTCGTTGCAACCATCGTTGGTGCCTATGTGCTTCAATGATTCAACTCAATTCATTGTTAGTCCTTCGAGCTGTGCCGGAATAATTACAGCCCAAGATTGGGTACAAAAGGTTGGTGCAACAACCCAATTGGATGATTATTGCAAGGAAGAATTATCTGGACTGACTTCATGTAGCTCGTGCCTTGCGGCCGGCATGAAGGTGACTTCACAGCTGGTGTCGCTAGACAAGAATGCTACAAAGTGCTTTTACTTCACAGTTCTATATGCAGCTGGCATTGTTAACCAACCAGGTCCAGAGGATATTAAGACTGCTGCTTGTATACTTGGCTTGCCACTAGCAGATTCAGCTATTAAAAAGACGTCCGATGGCCCAGAGCGAGGTCGCTTATTCAAATTTATTTTTGGGTTCATTGGTGCTTTCATATCTGTTGTGGTTTTATTGGGATCAGTCATGCTCTGTTGGTTTTGGGATAAGCGGAAGAAGCGCAAGGCGGCTCATGCAGAATTCGTCGGCAATTTCAAGGCTAGTTTGAGACTCAATACGGGTGTTACGTGGTTTCGATTAGGCGATCTCGAACGTGCCACTGATGGGTTCTCCCAGAGGAATCTGATCGGTCGAGGTGGATATGGGGTGGTGTACAAGGGAACCCTCTCAGATGGTACTACAGTTGCTGTGAAGAAGATACTTGATTTAGATTCGAAAAGGGACGACGAATTCTCCAATGAGGTTGAGATCATTAGCAACATAAAGCACAGGAATCTCCTCCCCTTGCGAGGCTGCTGCGTAACAAGCGATGATTTCAAAGGTAAGCAGAGGTATCTTGTCTATGATTACATGCCCAACGGTAGCCTCGAGGACCTTCTCTTTGACAATAACAAGGAGTTGAGTTGGCCTCACCGCAAGAACATAATCATAGACGTGACGAAGGGGCTCGCTTACTTACATTATGGAATCAAGCCTGCCATCTACCACAGAGACATCAAGGTCACCAACATACTCTTGGACTCAGAAATGAAGGCGAGGGTGGCAGATTTCGGACTGGCAAAACAAAGTAGAGAAGACCAGACTCATCTTACCACCAGAGTCGCTGGCACGCATGGCTATCTAGCCCCAGAATACGCCCTGTATGGGCAGCTGACAGAAAAGAGTGATGTTTATAGCTTAGGCATCGTAATTCTTGAGATTATGAGTGGGAGGAAGGTGCTCGACACATCATCACCGTCCACGCTGCTTATTACTGATTGGGCTTGGATGCTCGTCAAATCGGGACGTATAGAAGAGGTATTCGACAAGTCAATAAGAGACGTAGGACCAAGAGGGATAATGGAGAGGTTTGTCCTCGTCGGACTTCTATGCGCACATGTCATGGTTGCATTTAGGCCTACCATTGCAAAGGCTCTAAAGATGTTGGAAGGCGACATCGACATACCCACATTACCAGATAGGCCGTTGCCTCTCAGTCACGAGTCCTTTCGATCTTCTCTGCAGTATAGTAATTCATCAAACAACAGATCAAGATCAAGCACGAGTCAAAGATGGATTGGATGA 1854 0.472 MRTSLFFSSLLYLLSSFSFASVHAASASTSTSACPIDLGYVETFPWDTSLCRDNNQHCCQTLLSLFGMGLSRHLKDTNMFQLPNAVSSSACHVEFQTRLAAMSLQPSLVPMCFNDSTQFIVSPSSCAGIITAQDWVQKVGATTQLDDYCKEELSGLTSCSSCLAAGMKVTSQLVSLDKNATKCFYFTVLYAAGIVNQPGPEDIKTAACILGLPLADSAIKKTSDGPERGRLFKFIFGFIGAFISVVVLLGSVMLCWFWDKRKKRKAAHAEFVGNFKASLRLNTGVTWFRLGDLERATDGFSQRNLIGRGGYGVVYKGTLSDGTTVAVKKILDLDSKRDDEFSNEVEIISNIKHRNLLPLRGCCVTSDDFKGKQRYLVYDYMPNGSLEDLLFDNNKELSWPHRKNIIIDVTKGLAYLHYGIKPAIYHRDIKVTNILLDSEMKARVADFGLAKQSREDQTHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSLGIVILEIMSGRKVLDTSSPSTLLITDWAWMLVKSGRIEEVFDKSIRDVGPRGIMERFVLVGLLCAHVMVAFRPTIAKALKMLEGDIDIPTLPDRPLPLSHESFRSSLQYSNSSNNRSRSSTSQRWIG* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00484 617 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Eupl03g00484 617 SMART serkin_6 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00484 617 ProSiteProfiles Protein kinase domain profile. 300 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00484 617 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 381 580 - -
Eupl03g00484 617 CDD STKc_IRAK 306 574 - -
Eupl03g00484 617 Pfam Protein kinase domain 301 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl03g00484 617 SUPERFAMILY Protein kinase-like (PK-like) 284 600 IPR011009 -
Eupl03g00484 617 Gene3D Transferase(Phosphotransferase) domain 1 381 578 - -
Eupl03g00484 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 424 436 IPR008271 GO:0004672|GO:0006468
Eupl03g00484 617 MobiDBLite consensus disorder prediction 597 617 - -
Eupl03g00484 617 FunFam Receptor-like serine/threonine-protein kinase At4g25390 265 380 - -
Eupl03g00484 617 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 143 610 - -
Eupl03g00484 617 ProSitePatterns Protein kinases ATP-binding region signature. 306 329 IPR017441 GO:0005524
Eupl03g00484 617 Gene3D Phosphorylase Kinase; domain 1 261 380 - -
Eupl03g00484 617 Pfam SPARK 29 183 IPR043891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00484 Eupl-Chr3 21063147 21066149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00484 27 594 Receptor kinase-like Gene Family AT1G11050 53.051 0.0 618
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Eupl03g00484 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00484 - - nnu:104605877 829.32