Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00473 ATGAGAGTTTGGATTATATATGTAGCAGCTGGAGTAAGAAAGAGAGAGAGAAACATAGAGAGAGAGATGGGTAGCCAGCAAAATCAACAACAAGCGATTGGGAGGGACCCACCATCACGGCTAGGAGGAAGCAATCGTATCGCTTCACTTGATTTGGAGACGATCACTACTGGGAATGATAACAAACACTTCCATCAAGAAGATCCCAAAGAACAGAAACCCGGGTGGAGGAAGTTTCTGTCCCATGTTGGCCCAGGTTTTCTAGTCTCCTTGGCTTATCTCGACCCTGGCAACTTGGAAACGGATCTACAAGCAGGAGCTAACCATAGATACGAGCTATTGTGGGTGATCCTTATCGGCTTGATCTTCGCTCTCATAATTCAGTCCCTAGCTGCCAATCTCGGCGTAACCACCGGCAAGCACTTATCGGAGCTGTGTAAAGTTGAATACCCGATATATGTGAAGTATTGTCTGTGGTTGCTAGCAGAGCTTGCAGTTATCGCTGCCGATATTCCTGAAGTAATTGGGACGGCCTTTGCACTCAATATTCTGTTTCACATCCCAGTATGGGTTGGAGTTCTCCTCACTGGTTTGAGTACTCTCCTACTTCTCGGCCTGCAGAGATATGGGGTTCGGAAGCTGGAAATGTTGATAGCATTGCTCGTATTCGTGATGGCGGGTTGTTATTTCGGGGAATTGAGTTATGTGAAGCCTCCTGCATCAGATTTGATGAAGGGGATGTTCATCCCCAAGCTCAATGGCCAAGGAGCCACCGGTGATGCCATCGCCTTATTGGGAGCACTCGTCATGCCGCATAATCTCTTTCTTCACTCGGCTCTAGTTCTCTCAAGGAAGATACCTCAGTCTGTCCAGGGGATCAATAATGCATGCAGATACTTCCTCATAGAGAGCGGATTTGCACTGTTCATCGCATTCTTGATTAATGTTGCGGTGGTCTCCGTCTCCGGTACCGTCTGCTCTGCCGATGATCTTTCCGATGAAAACGCGAAACAATGCAGTGATCTCACACTTAACTCTGCTTCTTTTCTTCTCAAGAATGTATTGGGAAAATCGAGTTCGACCATTTACGCCATTGCACTACTTGCTTCAGGACAAAGCTCCACCATTACTGGTACTTATGCAGGCCAGTATATCATGCAGGGTTTTTTGGACCTTAAACTGAAGACTTGGAAGAGGAACCTGATGACCCGGTGCATCGCAATTACACCCAGCCTCATTGTCTCCATAATCGGTGGATCTTCTGGGGCTGGTCGACTCATCATCATCGCTTCGATGATACTTTCCTTCGAGCTGCCCTTTGCTCTCATCCCACTCCTCAAATTCAGCAGCAGCACTACCAAGATGGGTCCTCACAAAAACTCCATCTATATCATTGTCATCTCGTGGATCTTGGGGTCTTGCATCATTGGGATCAACATCTATTACTTGAGCACAGCTTTCGTCGATTGGTTGATCCACAACAGCCTACCAAAAGTAGCTAACGTTTTCGTCGGGATAATTGTGTTCCCTCTCATGGCCATCTACATTATTTCCGTCCTCTACTTAACCTTTCGGAAAGACATGGCCGTGACATTCATCGATGCACCCAAACTAGACCCTAATACCCAGAACCGAATGGAGAATGGGCTCAACTCGGCTGATGGTGGGTTCGGTTCAGACGATGTTCCTTATAGAGAGGACCTAGCCGACATCCCACTCCCAAAATAA 1728 0.4716 MRVWIIYVAAGVRKRERNIEREMGSQQNQQQAIGRDPPSRLGGSNRIASLDLETITTGNDNKHFHQEDPKEQKPGWRKFLSHVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVTTGKHLSELCKVEYPIYVKYCLWLLAELAVIAADIPEVIGTAFALNILFHIPVWVGVLLTGLSTLLLLGLQRYGVRKLEMLIALLVFVMAGCYFGELSYVKPPASDLMKGMFIPKLNGQGATGDAIALLGALVMPHNLFLHSALVLSRKIPQSVQGINNACRYFLIESGFALFIAFLINVAVVSVSGTVCSADDLSDENAKQCSDLTLNSASFLLKNVLGKSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDLKLKTWKRNLMTRCIAITPSLIVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSTTKMGPHKNSIYIIVISWILGSCIIGINIYYLSTAFVDWLIHNSLPKVANVFVGIIVFPLMAIYIISVLYLTFRKDMAVTFIDAPKLDPNTQNRMENGLNSADGGFGSDDVPYREDLADIPLPK* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00473 575 Hamap Divalent metal cation transporter MntH [mntH]. 66 487 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 NCBIfam Nramp family divalent metal transporter 84 450 - -
Eupl03g00473 575 MobiDBLite consensus disorder prediction 21 42 - -
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 371 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 186 205 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 211 232 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 158 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 261 284 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 399 416 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 PRINTS Natural resistance-associated macrophage protein signature 431 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 77 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 Pfam Natural resistance-associated macrophage protein 100 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00473 575 MobiDBLite consensus disorder prediction 543 575 - -
Eupl03g00473 575 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 59 528 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00473 Eupl-Chr3 20661506 20667859 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00473 72 575 Inorganic Solute Cotransporters AT1G15960 61.736 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00473 K21398 - nnu:104606647 883.248