Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00472 ATGGAGAACCAGCAAATTCAACAAGAAGCGATCGAGAGGGACCCACCACCATCACAGGGAGGAGGAAGCAATAATCACATCGATTCACTTGCTGTGGAGAAGAAGATCCATCAACAGGATCCCAACTACCAGAAACCCGGGTGGAGGAAGTTTTTGTACTACGTTGGTCCTGGTTTTCTCGTCTCTTTAGCTTATCTCGACCCTGGCAACTTGGAAACGGATCTACAAGCCGGAGCTAATCATAGATACGAGCTATTGTGGGTGATCCTTATCGGTTTGATCTTCGCTCTCATAATCCAGTCTCTAGCTGCCAATCTCGGTGTAACCACTGGGAAGCACTTATCGGAGCTATGTAAAGTGGAATACCCGATATATGTGAAGTATTGTCTGTGGTTGCTAGCCGAGATTGCTGTTATCGCTGCTGATATTCCCGAAGTGATTGGGACGGCCTTTGCACTGAATATTCTGTTTCACGTCCCAGTTTGGCTTGGAGTTCTGTTAACTGGTTTTAGCACCCTCTTACTTCTCGGCCTGCAGAGATATGGGGTTCGGAAGCTGGAAATGTTGATAGCAGTGCTCGTATTCGTGATGGCGGGTTGTTATTTTGGGGAATTGAGTTATGTAAACCCTCCTGCATCAGATTTGATGAAGGGAATGTTCATCCCTAAGCTCAATGGGCAAGGAGCCACCGCTGATGCCATCGCCTTATTAGGCGCACTCGTCATGCCGCATAACCTCTTTCTTCACTCTGCTCTAGTTCTCTCAAGGAAGATACCTCAGTCTGTCCAGGGGATCAATAATGCATGCAAATACTTCCTTATAGAGAGTGGATTTGCATTGTTCATCGCATTCTTAATTAACGTTGCGGTTGTCTCCGTCTCCGGCACCGTCTGCTTTGCAGAGAATCTCTCAGATGAGAACGCCGATCGATGCAACGATCTCACCCTTAACTCTGCTTCTTTCCTTCTCAAGAATGTATTGGGAAAATCGAGTTCGACCATTTACGCCATTGCGCTACTTGCTTCGGGACAAAGCTCCACCATTACTGGTACTTATGCAGGCCAGTATATCATGCAGGGTTTTTTGGACATTAAAATGAAGACGTGGAAGAGGAACCTGATGACCCGGTGCATCGCGATTACGCCTAGCCTCATTGTCGCCATAATCGGTGGATCTTCCGGGGCTGGTCGACTCATCATCATCGCCTCGATGATACTTTCCTTTGAGCTCCCCTTTGCTCTCATCCCTCTCCTCAAATTCAGCAGCAGCATTACTAAGATGGGGCCTCACAAAAACTCCATCTATATCATCGTCGTCTCGTGGTTCCTAGGGTTATGCCTCATTGGGATCAACGTCTATTACTTGAGTACAGCTTTCGTCGATTGGCTGATCCACAACAGCCTGCCAAAAGTAGCGAATGTGTTCGTTGGGATAATCGTGTTTCCTCTCATGGCCATCTACATTCTTTCCGTTATCTACTTAACCTTTCGGAAAGACACGGCCGTGACATTCATCGATGCACCCAAACTAGACCCTAATGTCCAAAACCGGATGGAGAAAGGGTTCGACTCGGCAGAAGAATGTTTTGGGAAAATTAAGTTCAACCATTTACGCCGTTGCACTACTAGCTTCAGGATCAAGCTCCACCATGCAGGCCAATATATCGTCATCTCGTGGTTCCTGGGGTTATGCATCATTGGGATCAACATCTATTACTTGAGCACAGCTTTCGTCGATTGGCTTATCCACAACAGCCTGCCAAAAGTAGCGAATGCGTTCGTTGGGATAATCATGTTTCTTCTCATGGCCAACTACATTCTTGCCATCGTCTATTTAACCTTTCAGACAGACACAGCTGTGACATTCATAGATGCACCCAATCTAGACCCTAGTGTCCAGAACCAAATGGAGAATGGGTTCCAATATGATGATGACCTTGCAGCCAGACTTAGATATGCAATAGAGGCCTATTACCTGTCTGCAATAAATAAATTTCATAATATGATTATGTTGACAGATAATTTACCTTCATATTTATTATAA 2043 0.4577 MENQQIQQEAIERDPPPSQGGGSNNHIDSLAVEKKIHQQDPNYQKPGWRKFLYYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIGLIFALIIQSLAANLGVTTGKHLSELCKVEYPIYVKYCLWLLAEIAVIAADIPEVIGTAFALNILFHVPVWLGVLLTGFSTLLLLGLQRYGVRKLEMLIAVLVFVMAGCYFGELSYVNPPASDLMKGMFIPKLNGQGATADAIALLGALVMPHNLFLHSALVLSRKIPQSVQGINNACKYFLIESGFALFIAFLINVAVVSVSGTVCFAENLSDENADRCNDLTLNSASFLLKNVLGKSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDIKMKTWKRNLMTRCIAITPSLIVAIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSITKMGPHKNSIYIIVVSWFLGLCLIGINVYYLSTAFVDWLIHNSLPKVANVFVGIIVFPLMAIYILSVIYLTFRKDTAVTFIDAPKLDPNVQNRMEKGFDSAEECFGKIKFNHLRRCTTSFRIKLHHAGQYIVISWFLGLCIIGINIYYLSTAFVDWLIHNSLPKVANAFVGIIMFLLMANYILAIVYLTFQTDTAVTFIDAPNLDPSVQNQMENGFQYDDDLAARLRYAIEAYYLSAINKFHNMIMLTDNLPSYLL* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00472 680 MobiDBLite consensus disorder prediction 1 26 - -
Eupl03g00472 680 NCBIfam Nramp family divalent metal transporter 56 421 - -
Eupl03g00472 680 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 39 501 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 371 388 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 403 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 183 204 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 343 362 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 158 177 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 130 156 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 PRINTS Natural resistance-associated macrophage protein signature 233 256 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 Pfam Natural resistance-associated macrophage protein 72 433 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 Hamap Divalent metal cation transporter MntH [mntH]. 38 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Eupl03g00472 680 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 49 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00472 Eupl-Chr3 20574062 20586228 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00472 557 638 Inorganic Solute Cotransporters AT1G80830 33.721 8.64e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00472 K21398 - nnu:104606647 840.106