Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00463 ATGAAGGGTGATGATTTACAGTTACCTCCAGGATTTAGATTTCATCCAACGGATGAGGAGTTGGTGATGCACTATTTGTGCCGTAAATGCGCCTCTCTGTCCATCTCCGTTCCAATAATCGCTGAGATTGATCTCTACAAATACGATCCATGGGTTCTACCTGGCAAGGCTCTGTACGGCGAAAAAGAGTGGTACTTCTTCTCGCCTAGGGACCGGAAGTACCCGAACGGGTCAAGACCGAACCGAGCAGCCGGGTCTGGATATTGGAAAGCAACTGGAGCCGATAAACCGATTGGGCATCCGAAGGCGATCGGAATAAAGAAGGCTTTGGTGTTTTACTCCGGTAAGGCACCGAGAGGAGAGAAAACCAATTGGATCATGCATGAGTACAGGCTCGCCGATGTCGATAGGTCGGCTCGCAAGAAGAACAGCTTAAGGCTGGACGATTGGGTGTTATGTCGAATTTACAACAAAAAAGGTGGGATAGAGAAGCATTCCAACGCAAACGAGAAGTCGACTCAGTCGATGACTTACCCGGAGACTGAGGAACAGAAGCCAGAAATTCTGACACACAGCCGGAACATGGCGGCACCGGCAACAGCACCGGTACCGGTACCATCACCGGTGATTAATGACTACATGTATTTCGACCCGTCGGATTCAATCCCGAGATTACACACGGATTCAAGCTGCTCGGAACACGTGGTGTCTACTGAATTCAACGCCACATGCGAGAGGGAGGTTCAAAGCGAGCCAAGATGGAGAGATTGGGAAAGAGCCCTTGATATGCCATTTAATAACATGGATGCCATTGCCAATACTCCTTATTCTCAATTCGACTTGCAAGACATGTTCATGTACCTGCAGAAACCCTTCTAA 879 0.4881 MKGDDLQLPPGFRFHPTDEELVMHYLCRKCASLSISVPIIAEIDLYKYDPWVLPGKALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKAIGIKKALVFYSGKAPRGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGIEKHSNANEKSTQSMTYPETEEQKPEILTHSRNMAAPATAPVPVPSPVINDYMYFDPSDSIPRLHTDSSCSEHVVSTEFNATCEREVQSEPRWRDWERALDMPFNNMDAIANTPYSQFDLQDMFMYLQKPF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00463 292 Pfam No apical meristem (NAM) protein 9 132 IPR003441 GO:0003677|GO:0006355
Eupl03g00463 292 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
Eupl03g00463 292 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 219 - -
Eupl03g00463 292 FunFam NAC transcription factor 17 162 - -
Eupl03g00463 292 SUPERFAMILY NAC domain 6 158 IPR036093 GO:0003677|GO:0006355
Eupl03g00463 292 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00463 Eupl-Chr3 20262827 20264830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00463 6 292 NAC Transcription Factor Family AT1G01720 65.347 8.46e-135 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Eupl03g00463 NAM 2.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00463 - - msin:131236629 446.432