Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00462 ATGTCAAAATCTCCCTCCCCTGAACCTCAACAGTCCGTTTCCTCATCTACTTCTCAGTCTAGGGAATCAAATGGAACAGCAGAAATGGATGATCCAGAAAGTACGATGGCTACGGTCGCTCATTTTGTTGAGCAGCTACATGCCAACATGTCCTCACCACATGAGAAGGAGCTTATTACTGCACGTTTGCTCGGTATTGCCAGAGCAAGAAAGGAAGCAAGAACACTTATTGGTTCCCACTCACAGGCAATGCCATTGTTTATATCTATCCTCAGGAGTGGAGCGTCTGCGGCAAAAGTGAATGTTGCTGCAACTCTGAGTATCCTCTGCAAGGAAGAAGACTTACGGTTGAAGGTACTTCTGGGTGGGTGCATACCACCGTTACTCTCAATTCTGAAGTCTGAATCATCTGAGGCCAGGAAGGCTGCCGCAGAGGCAATCTTTGAAGTTTCCTCTGGTGGGTTATCAGACGATCATGTGGGTATGAAAATTTTTATTACTGAAGGTGTAGTTCCTACTCTGTGGGATCAACTCAATCCAAAGATCAAGCAGGACAAAGTGGTGCAGGGATTTGTGACCGGGGCCCTGAGGAATCTTTGTGGTGACAAAGCCTGCTACTGGAGGGCCACACTTGAGGCCGGAGGAGTAGATATTATTGTGGGGCTTCTTTCTTCTGATAATGATGCTGCTCAGTCCAATGCAGCATCTCTCTTGGCACGTTTAATGTTGGCTTTCAGTGATAGCATCCCCAAAGTTATAGATGCCGGAGCTGTCGAAGCTCTGCTTCGTTTGGTGGGTCAGGAAAACAATATTTCCATCCGTGCCAGTGCTTCCGATGCTTTGGAGGCTCTTTCGTCCAAGTCAACTAGGGCTAAGAAAGCTGTAGTGGATGCAGATGGCATACCCATTCTCATTGGGGCTGTAGTAGCTCCTTCTAAAGAGTGTATGCAAGGTGAGTGTGGCCAGGCTCTACAGGGACATGCTGTACGTGCTCTAGCAAACATCTGTGGTGGGATGTCTGATCTAATTCTTTATCTTGGAGAACTGTCCCAGTCACCCCGCTTGGCTGCCCCAGTTGCTGATATAATAGGAGCACTTGCGTACTCATTGATGGTCTTTGAGCAAGCATCTGGGGTGGAAAAAGTACCATTTGATGCGGCACAAATAGAAGATACTCTAGTAATGCTACTAAAGCCTCGAGATAATAAGCTAGTTCAGGAGCGTGTACTTGAGGCTCTGGCTAGCCTTTACGGCAACCCCTACCTATCAAGATGGCTCAATCATGCAGATGCAAAGAGGGTGCTCATTGGGCTCATAACCATGGGTTCACCTGATGTGCAAGAATATCTAATACTCTTGTTGACAAGCTTATGCTGCGATGGGTTGGGCATCTGGGAGGCCCTTGGGAAGAGAGAGGGTATTCAGTTGCTGATATCATTGTTGGGATTATCTAGTGAGCAACATCAAGAGTACGCTGTTGAGTTGCTGGCAATTTTGACTGACCAAGTTGATGACAGCAAGTGGGCAATCACTGCTGCTGGTGGTATCCCTCCACTGGTGCAGTTATTAGAGATGGGATCTCAGAAAGCAAGGGAGGATGCGGCGCATGTGCTGTGGAACTTATGCTGTCATAGCGAAGATATCCGTGCATGTGTTGAAAGTGCTGGAGCAGTTCCAGCATTCCTATGGCTTCTAAAAAGTGGTGGACCCAAAGGACAAGAAGCTTCGGCTATGGCACTTACAAAGCTTATCCAGTCAGCTGACTCTGCCACTGTTAATCAGTTGTTGGCTTTGCTCCTGGGAGACACTCCAAGCTCAAAGGCCAACATTATTAGGGTTCTGGGTCATGTACTTACAATGGCATCCCACAAAGACCTTGTGCATAAGGGAGCTCCTGCTAATAAAGGCCTCAGATCACTTGTCCAGGTTCTCAATTCCTCGAATGAGGAAACTCAAGAGTACGCAGCTTCTATCTTAGCCGATCTATTCAGTAATAGACAAGATATTTGTGACAGTCTTGCCACCGATGAAATTGTTCATCCTTGTATGAAGCTTTTGACAAGCAAAACTCAGGTTATCGCAACACAATCAGCTCGGGCCTTGGGTGCGCTCTCCCGTTCAACCAAGGCTAAGGCTACAAACAAGAAGTCTTATATTGCTGAAGGGGATGTCAAGCCTTTGATCAAGCTGGCAAAAACTTCTTCCATTGATGCTGCTGAGACTGCAGTTGCTGCATTAGCCAATCTTCTCTCAGATCCTCATATAGCTGCAGAAGCTTTGGCAGAAGATGTTGTCTCGGCTTTGATAAGAGTATTGGGAGAAGGGACTTCGGAAGGTAAGAAAAATGCATCACGTGCCCTTCACCAATTATTGAACCATTTTGCAGTGGGTGATGTGCTTACTGGAAATGCTCACTGTCGTTTCGCGGTTCTTGCACTTGTTGATTGCTTATCTTTAATGGATATGGAAGGGACTGATTGTACTGATGTTCTAGAAGTAGTTGCCTTGTTGGCTAGGACAAAACAGAGTGTGAACTTCACCTACCCTCCATGGTCTGCCCTTGCTGAAGTTCCTTCAAGCTTAGAGCCATTAGTCCGTTGCCTAGCTGAAGGGCTTCCTCCGGCACAAGATAAGGCCATTGAAATACTGTCTAGACTATGTGGTGATCAACCAGTTGTACTGGGGGATCTGTTGGTCGGAAAATCAAGCTGCATTCCTTCACTCGCTAATAGAATAATGAACTCGTCCAGCTTGGAAGTGAGAGTTGGCGGGGCTGCACTACTCATTTGTGCGACCAAGGAACACAAACAGCAGTCAATGGATGTACTTGATGCATCGGGGTTTCTAAAGCCACTCATTTATGCTCTGGTAGATATGATGAAGCCCAATTCTAGCTGCAGCTCTCTTGAAATTGAAGTCAGAACCCCTAGAGGTTATGCTGAAAGGACAATATTCCAAGAAAGTGATGACTTTGAGGTTCCTGATCCAGCTACTGTTTTGGGAGGAACAGTTGCCTTGTGGTTGCTGTCAATAATTTCTTCATTTCATGCGAAGAACAGACACACTGTCATGGAAGCTGGTGGAGTAGAGGCTCTCTCTGATAAGCTTGCAAGTTACACTTCCAATCCACAGGCAGAATTTGAGGATACAGAGGGTATATGGATTAGTTCCCTTCTCTTGGCTATTTTGTTCCAGGATGCTAATGTTGTTCTATCTCCTGCCACCATGCGAATTATACCTTCACTTGCTCTTTTGCTGAGGTCTGATGAAGTTATTGACCGATACTTTGCTGCTCAGGCAATGGCTAGTCTTGTTTGTGGTGGAAATAAAGGAATATATCTAGCGATCGCAAATTCTGGTGCAGTTGCAGGTTTAATTACTCTGATTGGTTATGTAGAATCAGACATGCCAAATCTTGTCACTTTATCTGAAGAATTTTCTTTGGTACGCAACCCTGATCAAGTTGTTCTAGAGCATCTCTTTGCAATTGAAGATGTAAGAGTTGGCTCTACTGCACGCAAGTCTATACCTCTGTTAGTGGACCTTTTGAGACCTATGCCAGATAGGCCCGGTGCCCCTCCAATTGCTGTTCGCCTTTTGATCCGTATTGCAGATGGAAGTGATGTGAACAAACTGGCTATGGCAGAAGCTGGAGCTCTGGATGCTTTAACCAAATACCTATCTTTGAGTCCTCAAGACTCAACTGAGACCACCATAGCTGAACTATTGAGAATCTTATTTAGCAACCCTGATCTGCTTCGACATGAAGCGTCACTTAATTCCTTGAATCAACTCATAGCCGTTCTGCGTTTGGGATCAAAAAACGCTAGGTTCAGTGCTGCTGGGGCTCTCCACGAACTTTTTGATGCTGAGAACATCAGAGATACTGAATTGGCCAGGCAGGCCATTCAACCATTAGTTGACATGCTTAATGCAGGATCAGAGAGAGAGCAACAGGCAGCTCTCATTGCCCTGATCAAGTTGACTTCCGGAAATGCTTCAAAGGCATCATTATTAACTGAAGTGGAAGGCAATACACTTGAGAGCCTGAACAAGATTTTGTCATCCACTTCATCATTGGAACTGAAGAGAAACGCTGCACAACTTTGCTTTGTTTTGTTTGGTAACTCAAAGGTGCGAGCATTGCCAGTTGCCTCTGAATGTATACAGCCCCTTATATCACTAATGCAGTCAGATACAACTTCGGCAGTGGAATCAGGCGCATGTGCTTTTGAGAGGTTGTTGGATGATGAACAACTAGTGGAACTTGCAGCAGCATATGATATTGTGGATCTTCTTGTTGGATTGGTTTCTGGCTCGAACCATCAACTTATAGAGGCTAGCATCAGCACTCTTACAAAGTTGGGGAAAGATCGTACTCACTGCAAGCTTGATATGGTCAAAGCTGGGATTATTGATAATTGTCTTGAGTTACTCCCTGTTGCACCCGGCTCCCTATGCTCCTCAATTGCAGAGTTGTTTCGTATCTTGACAAATAGTAGTGGGATTGCAAGAAGCTCTGGTGCTGCCAGAATGGTAGAACCTCTTTTCATGGTTTTACTCCGTCCAGATTTCAGCATGTGGGGACAGCATAGTGCTTTGCAAGCACTTGTAAATATTCTGGAGAAACCACAAAGCCTTGCAACTTTGAAACTCACTCCTAGCCAAGTCATTGAACCTCTGATTTCATTTTTAGAATCCCCTTCTCAGGCCATTCAGCAGCTTGGTACTGAATTGTTGTCACATCTTCTAGAACAGGAGCATTTCCAACAAGATATTACCACACAAAATGCAGTCGTGCCTCTCGTGCAGCTTGCGGGAATTGGAATATTGAATTTACAGCAAACAGCAATAAAGGCGTTAGAGAGTATCTCTACAAGCTGGCCAAAGGCTGTTGCTGATGCCGGGGGTATTTTCGAGCTCTCTAAGGTTATTATTCAAGATGACCCTCAACCACCTCATGCATTGTGGGAATCAGCTGCATTGGTTCTCTCAAATGTTTTGCGGTACAATGTGGAGTACTATTTCAAAGTTCCTCTAGTGGTCCTTGTGAGAATGTTGCACTCCACATCTGAGAGCACTATTACAGTAGCTCTTAATGCCTTAATTGTTCAAGAGAGGAGTGATGCTTCGAGTGCCGAACTGATGGCTGAGGCTGGTGGCATAGATGCATTGTTGGACCTTCTAAGATCTCATCAGTGTGAAGAATCATCTGGAAGACTACTTGAAGCTTTATTTAACAATGTGAAGGTGCGAGAAATGAAGGTTTCTAAGTATGCCATAGCTCCTTTATCTCAATATCTGTTGGATCCACAAACCAGATCACAGCCCGGCAGACTTCTTGCAGCTCTTGCTCTTGGTGACCTCTTCCAGCACGAGGGACTTGCCAGAGCCAAGGATTCTGTATCTGCATGCCGTGCACTGATAAGCTTGCTTGAAGACCAGCCGACTGAAGAGATGAAAATGGTGGCAATATGTGCATTGCAAAACTTGGTTATGCACAGTAGGACAAATAGGCGAGCTGTTGCCGAAGCCGGTGGCATATTGGTGATACAGGAACTACTACTGTCTCCAAATTCGGAAGTTGCTGGGCAGGCAGCATTGCTGATTAAATTCCTGTTTTCTAATCACACGCTTCAAGAATACGTCTCAAATGAGCTCATCAGGTCTCTAACAGCTGCACTGGAGAAAGAATTGTGGTCCACAGCAACTATCAATGAGGAGGTCCTGAGAACTATAAATGTGATATTCACCAATTTTTCCAAGCTCCACATTTCTGAGGCAGCTACCCTGTGCATCCCACATTTGGTTGGAGCACTCAAGGCCGGAAGTGAGGCTGCTCAGGAATCTGTATTGGACACCTTATGCTTGTTAAAACATTCATGGTCAACCATGCCTATAGATATTGCCAAAGCTCAAGCCATGATTGCCGCTGAAGCTATTCCTATTCTGCAATTGCTAATGAGGACCTGCCCTCCAAATTTTCATGAAAGAGCAGACAGCCTATTGCATTGCTTACCAGGGTGTTTGACTGTCACTATTAAGCGTGGGAACAACTTGAAGCAGACCATGGGAAGCACAAATGCCTTCTGTCGGTTGACAATAGGAAATGGTCCTCCACGGCAGACCAAGGTAGTGAGCCACAGTACATGTCCAGAATGGAAAGAAGGGTTTACTTGGGCATTTGATGTACCTCCAAAGGGGCAAAAACTTCACATCCAGTGCAAAAGCAAAAATACATTTGGGAAGACAACACTTGGAAGAGTGACAATCCAGATAGACAAAGTTGTAGCGGAAGGAGTATACAGTGGGTTCTTCAGCCTCAACCACGACAACAACAAGGATGGATCTTCTCGAACACTTGAAATCGAGATCATCTGGTCCAACAGGACGTCAAATGAGAGCATGTGA 6411 0.4541 MSKSPSPEPQQSVSSSTSQSRESNGTAEMDDPESTMATVAHFVEQLHANMSSPHEKELITARLLGIARARKEARTLIGSHSQAMPLFISILRSGASAAKVNVAATLSILCKEEDLRLKVLLGGCIPPLLSILKSESSEARKAAAEAIFEVSSGGLSDDHVGMKIFITEGVVPTLWDQLNPKIKQDKVVQGFVTGALRNLCGDKACYWRATLEAGGVDIIVGLLSSDNDAAQSNAASLLARLMLAFSDSIPKVIDAGAVEALLRLVGQENNISIRASASDALEALSSKSTRAKKAVVDADGIPILIGAVVAPSKECMQGECGQALQGHAVRALANICGGMSDLILYLGELSQSPRLAAPVADIIGALAYSLMVFEQASGVEKVPFDAAQIEDTLVMLLKPRDNKLVQERVLEALASLYGNPYLSRWLNHADAKRVLIGLITMGSPDVQEYLILLLTSLCCDGLGIWEALGKREGIQLLISLLGLSSEQHQEYAVELLAILTDQVDDSKWAITAAGGIPPLVQLLEMGSQKAREDAAHVLWNLCCHSEDIRACVESAGAVPAFLWLLKSGGPKGQEASAMALTKLIQSADSATVNQLLALLLGDTPSSKANIIRVLGHVLTMASHKDLVHKGAPANKGLRSLVQVLNSSNEETQEYAASILADLFSNRQDICDSLATDEIVHPCMKLLTSKTQVIATQSARALGALSRSTKAKATNKKSYIAEGDVKPLIKLAKTSSIDAAETAVAALANLLSDPHIAAEALAEDVVSALIRVLGEGTSEGKKNASRALHQLLNHFAVGDVLTGNAHCRFAVLALVDCLSLMDMEGTDCTDVLEVVALLARTKQSVNFTYPPWSALAEVPSSLEPLVRCLAEGLPPAQDKAIEILSRLCGDQPVVLGDLLVGKSSCIPSLANRIMNSSSLEVRVGGAALLICATKEHKQQSMDVLDASGFLKPLIYALVDMMKPNSSCSSLEIEVRTPRGYAERTIFQESDDFEVPDPATVLGGTVALWLLSIISSFHAKNRHTVMEAGGVEALSDKLASYTSNPQAEFEDTEGIWISSLLLAILFQDANVVLSPATMRIIPSLALLLRSDEVIDRYFAAQAMASLVCGGNKGIYLAIANSGAVAGLITLIGYVESDMPNLVTLSEEFSLVRNPDQVVLEHLFAIEDVRVGSTARKSIPLLVDLLRPMPDRPGAPPIAVRLLIRIADGSDVNKLAMAEAGALDALTKYLSLSPQDSTETTIAELLRILFSNPDLLRHEASLNSLNQLIAVLRLGSKNARFSAAGALHELFDAENIRDTELARQAIQPLVDMLNAGSEREQQAALIALIKLTSGNASKASLLTEVEGNTLESLNKILSSTSSLELKRNAAQLCFVLFGNSKVRALPVASECIQPLISLMQSDTTSAVESGACAFERLLDDEQLVELAAAYDIVDLLVGLVSGSNHQLIEASISTLTKLGKDRTHCKLDMVKAGIIDNCLELLPVAPGSLCSSIAELFRILTNSSGIARSSGAARMVEPLFMVLLRPDFSMWGQHSALQALVNILEKPQSLATLKLTPSQVIEPLISFLESPSQAIQQLGTELLSHLLEQEHFQQDITTQNAVVPLVQLAGIGILNLQQTAIKALESISTSWPKAVADAGGIFELSKVIIQDDPQPPHALWESAALVLSNVLRYNVEYYFKVPLVVLVRMLHSTSESTITVALNALIVQERSDASSAELMAEAGGIDALLDLLRSHQCEESSGRLLEALFNNVKVREMKVSKYAIAPLSQYLLDPQTRSQPGRLLAALALGDLFQHEGLARAKDSVSACRALISLLEDQPTEEMKMVAICALQNLVMHSRTNRRAVAEAGGILVIQELLLSPNSEVAGQAALLIKFLFSNHTLQEYVSNELIRSLTAALEKELWSTATINEEVLRTINVIFTNFSKLHISEAATLCIPHLVGALKAGSEAAQESVLDTLCLLKHSWSTMPIDIAKAQAMIAAEAIPILQLLMRTCPPNFHERADSLLHCLPGCLTVTIKRGNNLKQTMGSTNAFCRLTIGNGPPRQTKVVSHSTCPEWKEGFTWAFDVPPKGQKLHIQCKSKNTFGKTTLGRVTIQIDKVVAEGVYSGFFSLNHDNNKDGSSRTLEIEIIWSNRTSNESM* 2137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00462 2136 SMART arm_5 245 286 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1544 1585 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 202 243 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1207 1248 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1289 1330 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1921 1960 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 460 501 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1709 1750 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 503 543 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 752 792 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 112 152 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1376 1416 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 288 337 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 70 111 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1586 1626 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 624 664 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1417 1457 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 1835 1875 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 711 751 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 157 201 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 545 585 IPR000225 GO:0005515
Eupl03g00462 2136 SMART arm_5 666 706 IPR000225 GO:0005515
Eupl03g00462 2136 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 514 556 IPR000225 GO:0005515
Eupl03g00462 2136 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2007 2113 IPR035892 -
Eupl03g00462 2136 Gene3D - 1798 2006 IPR011989 -
Eupl03g00462 2136 SUPERFAMILY ARM repeat 120 600 IPR016024 -
Eupl03g00462 2136 SUPERFAMILY ARM repeat 1613 2006 IPR016024 -
Eupl03g00462 2136 Gene3D - 852 1342 IPR011989 -
Eupl03g00462 2136 Gene3D - 1343 1590 IPR011989 -
Eupl03g00462 2136 MobiDBLite consensus disorder prediction 1 33 - -
Eupl03g00462 2136 Pfam Armadillo/beta-catenin-like repeat 507 542 IPR000225 GO:0005515
Eupl03g00462 2136 Gene3D - 629 801 IPR011989 -
Eupl03g00462 2136 Gene3D - 374 628 IPR011989 -
Eupl03g00462 2136 Gene3D - 157 367 IPR011989 -
Eupl03g00462 2136 Gene3D - 29 156 IPR011989 -
Eupl03g00462 2136 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1803 1846 IPR000225 GO:0005515
Eupl03g00462 2136 SMART C2_3c 2009 2105 IPR000008 -
Eupl03g00462 2136 Gene3D C2 domain 2007 2136 IPR035892 -
Eupl03g00462 2136 ProSiteProfiles C2 domain profile. 1989 2106 IPR000008 -
Eupl03g00462 2136 CDD C2 2010 2100 - -
Eupl03g00462 2136 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 635 668 IPR000225 GO:0005515
Eupl03g00462 2136 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 8 2130 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Eupl03g00462 2136 SUPERFAMILY ARM repeat 1190 1545 IPR016024 -
Eupl03g00462 2136 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 256 300 IPR000225 GO:0005515
Eupl03g00462 2136 SUPERFAMILY ARM repeat 592 962 IPR016024 -
Eupl03g00462 2136 Gene3D - 1591 1797 IPR011989 -
Eupl03g00462 2136 MobiDBLite consensus disorder prediction 1 31 - -
Eupl03g00462 2136 Pfam C2 domain 2009 2108 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00462 Eupl-Chr3 20200852 20219260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00462 474 790 U-box Gene Family AT3G46510 24.765 1.36e-08 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00462 - - vvi:100260874 3559.61