Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00456 ATGGCGGAGAAGAAGAAGTTCGATGTCAAGAGCGCTGCGTGGCTAGTGAAGGAGTTGAGAGGGAGCTTTGCGTCAGGCACGACGAAGAGCTACGAATGGAGAGTAGCGCAGTTGAAGAGCCTCGTCAAGATGGTCGAAGAGAACGAGCAAGAGATCTTCGAAGCTCTCCATAAGGACCTCTCCAAGCCTGAACTCGAGGCTTTCGTCTCCGAGATTTCTATCACAAAGACCTCATGTAATTTGGCCCTTAAGGAATTAAAACGCTGGATGAAGCCGGAAAAGGCTAAAACTTCAATAACAACTTTTCCATCATCAGCTGAAATTGTGTCAGAACCACTAGGCGTCGTATTGATCATTTCAGCATGGAACTATCCTTTATTGTTATCTCTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCCGTGGTCCTAAAACCATCAGAAATTGCTCCAGCCACATCCTCCTTACTTGCAAGGTTATTAGAGAAGTACCTAGACAGATCTGCCATAAGGGTTGTTGAAGGGGCTGTTCCTGAAACATCTGCACTGCTGGAGCAGAAGTGGGATAAAATATTCTATACAGGTAATGGAAAAGTGGGGCGCATTGTGATGGCTGCTGCCGCAAAGCACCTTACACCTGTGGTTTTAGAGCTTGGAGGAAAATCTCCTGTAGTTGTTGATTCAAACATCAACTTAGAAGTTGCTGCAAGGCGGATTGTTGCAGGAAAGTGGGGATGCAATAATGGACAAGCTTGCATTGCTCCTGATTATATCATAACCACGAAAGCTTATGCTCCAAAGTTGATAGATTCTTTGATATGTACATTGGAGGAATTCTTTGGGACAGATCCACTGGAATCGAAAGAACTGTCCTGCATTGTGAACTCCAACCATTTTGAACGATTGACAAAGATGTTGGATGAGGATAAGGTTTCTGGTAAAATTGTCATTGGAGGCAAACGAGATAAAACCCGTCTAAAGATTGCTCCCACCATCTTGTTGGATGTTCCAGAAGACTCTCTGATCATGAATGAGGAGATATTTGGGCCCCTACTTCCAATTATCTCAGTCGACAAGGTGGAAGACAGCTTTGACATGATAAACTCGCGACCGAAGCCTCTTGCGGCATACCTCTTCACCAATGACAAGAAGCTTGAGAAGGAGTTTGTGAATTCCATCTCTTCAGGGGGGATGCTCATCAATGACACAGTCATCCATATTACTTGTCACACTTTACCTTTTGGAGGAGTTGGAGAGAGTGGATTTGGTTCATACCATGGTAAGTTCTCATTCAATGCGTTTAGTCACAAGAAGGCCGTGTTGTACCGAGGTTTTGGTGGGGATTCATCAGTAAGGTACCCACCGTATACGCTTCGAAAGCAAAGATTATTGAGAGCCCTGCTCAACAGTGATATCTTTGGCATACTTCTTGCTTTACTTGGATGGTAA 1452 0.4449 MAEKKKFDVKSAAWLVKELRGSFASGTTKSYEWRVAQLKSLVKMVEENEQEIFEALHKDLSKPELEAFVSEISITKTSCNLALKELKRWMKPEKAKTSITTFPSSAEIVSEPLGVVLIISAWNYPLLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLARLLEKYLDRSAIRVVEGAVPETSALLEQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLEVAARRIVAGKWGCNNGQACIAPDYIITTKAYAPKLIDSLICTLEEFFGTDPLESKELSCIVNSNHFERLTKMLDEDKVSGKIVIGGKRDKTRLKIAPTILLDVPEDSLIMNEEIFGPLLPIISVDKVEDSFDMINSRPKPLAAYLFTNDKKLEKEFVNSISSGGMLINDTVIHITCHTLPFGGVGESGFGSYHGKFSFNAFSHKKAVLYRGFGGDSSVRYPPYTLRKQRLLRALLNSDIFGILLALLGW* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00456 483 SUPERFAMILY ALDH-like 15 447 IPR016161 GO:0016491
Eupl03g00456 483 FunFam Aldehyde dehydrogenase 20 224 - -
Eupl03g00456 483 FunFam Aldehyde dehydrogenase 221 421 - -
Eupl03g00456 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 221 421 IPR016163 GO:0016620
Eupl03g00456 483 PIRSF ALDH 1 479 IPR012394 GO:0006081
Eupl03g00456 483 PANTHER ALDEHYDE DEHYDROGENASE 11 476 IPR012394 GO:0006081
Eupl03g00456 483 CDD ALDH_F3FHI 12 443 - -
Eupl03g00456 483 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 217 224 IPR029510 GO:0016491
Eupl03g00456 483 Pfam Aldehyde dehydrogenase family 30 441 IPR015590 GO:0016491
Eupl03g00456 483 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 21 439 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00456 Eupl-Chr3 20024341 20031063 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00456 3 483 Aldehyde Dehydrogenase Gene Family AT4G34240 67.152 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00456 K00128 - psom:113356410 781.941