Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00455 ATGAAGCCGGAAAAGGTTAAAACTTCAATAACAACTTTTCCATCATCAGCAGAAATTGTGTCAGAACCACTAGGTGTTATATTGATCATTTCAGCATGGAACTATCCCTTATTGTTATCTCTTGATCCAGTCATTGGAGCTATAGCAGCTGGTAATGCTGTGGTCCTAAAACCATCAGAACTTGCTCCAGCCACATCCTCGTTGCTTGCAAGGTTGTTAGAGAAGTACCTAGACGGATCTGCCGTAAGAGTTGTTGAGGGGGCTGTTCCTGAGACATCTGCGCTGCTGCTGCAGAAGTGGGATAAAATATTCTATACAGGTAATGGAAGAGTTGGGCGCATTGTGATGGCTGCTGCCGCAAAGCACCTTACACCTGTGGTTTTAGAGCTTGGAGGAAAATCTCCTGTTGTTGTTGACTCAAACATCAACTTACAAGTTGCTGCGAGGCGGATTGTTGCAGGAAAGTGGGGATGCAATAACGGACAAGCCTGCATTGCTCCTGATTACATCATAACCACAAAATCTTATGCTCCACAGTTGATAGATGCTTTGAAATGTACATTGGAGGAATTCTTTGGGAGTGATCCACTGGGATCAAAAGCCCTGTCCCGCATTGTAAACGCCAACCACTTTGCACGCTTGACAAAGCTGTTGGATGAGGATGGGATTTCTGATAAGGTTGTCCTTGGAGGCCAACGAGTAACTGGCCAAAATATTGCTCCCACCATCTTGCTCGATGTTCCAGAAGACTCTCGGATCATGACTGAGGAGATATTTGGGCCTTTACTTCCCATTCTCACCGTCGACAAGGTGGAAGACAGCTTTGACGTGATAAACTCGCGACCGAAGCCTCTTGCAGCGTATCTCTTCACCAATGACAAGAAGCTGGAAAAGGAGTTTGTGAATAACATCTCTGCAGGAGGGATGCTCATCAATGACACTGTCCTCCATCTCGCTACTGCAACTTTACCTTTTGGAGGAGTTGGAGAGAGTGGATTTGGTTCGTACCATGGTAAGTTCTCGTTCGATGCGTTTAGCCACAAGAAGGCCGTGTTGTACCGAGGTTTTTTTGGAGATGCATCTGCAAGGTACCCACCATATACCCCCCGAAAGCAAAGATTATTGAGAGCCCTGCTCAATGGCGATATCTTTGGCATACTTCGTGCTTTAATCGGATGGTAA 1182 0.4594 MKPEKVKTSITTFPSSAEIVSEPLGVILIISAWNYPLLLSLDPVIGAIAAGNAVVLKPSELAPATSSLLARLLEKYLDGSAVRVVEGAVPETSALLLQKWDKIFYTGNGRVGRIVMAAAAKHLTPVVLELGGKSPVVVDSNINLQVAARRIVAGKWGCNNGQACIAPDYIITTKSYAPQLIDALKCTLEEFFGSDPLGSKALSRIVNANHFARLTKLLDEDGISDKVVLGGQRVTGQNIAPTILLDVPEDSRIMTEEIFGPLLPILTVDKVEDSFDVINSRPKPLAAYLFTNDKKLEKEFVNNISAGGMLINDTVLHLATATLPFGGVGESGFGSYHGKFSFDAFSHKKAVLYRGFFGDASARYPPYTPRKQRLLRALLNGDIFGILRALIGW* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00455 393 Pfam Aldehyde dehydrogenase family 16 351 IPR015590 GO:0016491
Eupl03g00455 393 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 349 IPR016162 GO:0016491
Eupl03g00455 393 FunFam Aldehyde dehydrogenase 1 135 - -
Eupl03g00455 393 SUPERFAMILY ALDH-like 8 358 IPR016161 GO:0016491
Eupl03g00455 393 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 128 135 IPR029510 GO:0016491
Eupl03g00455 393 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 132 331 IPR016163 GO:0016620
Eupl03g00455 393 PANTHER ALDEHYDE DEHYDROGENASE 1 386 IPR012394 GO:0006081
Eupl03g00455 393 FunFam Aldehyde dehydrogenase 132 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00455 Eupl-Chr3 20004162 20018629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00455 1 392 Aldehyde Dehydrogenase Gene Family AT1G44170 71.756 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00455 K00128 - psom:113356410 655.595