Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00452 ATGGGTCATAAGGAAGATCGTCTGCAGACAAGCAAGGGTGGAATCAATAACGAGGGTTTGTGCTCGACCATCGATAGCGAAAATGTAGAGACCTATACCACACCGCGCCATAGTGCAGATAAAGATTTGGCAACGTGTCGTGTGTGTCAATGTGCAGAATCTGACAGAAGGGGAGATGTTGCATTAGGATTCTTGGATATCAAGCCTCCATCACAAGAGGTTCCGAAAAATAATGAGGATCAGAACTCCAATAGCAAGGAAGTTTTGAAAGGTGTTGAAAGTGATATTGTCCATGTTAAGACTTTTGGGAGGGAGTCGGGGGTTATTGAGTTCATAAGCCCCGAGGGGGAGATATTCATTTGTAATGCTGATCTAGAGGCAGGTTCCTATCACCATCAAGACACACTTATTTCTCTTGGTTGTTCTTGCAAAAGTGATCTTGCGCTTGCACATTATGCTTGTGCATTGAAGTGGTTCATTAACCATGGATCCACCGTGTGTGAAATTTGTGGAAGTGTAGCGAAAAATGTCAGACCTGCTGACTTTAAAAAGGTTGTGGCTTCTCTAAAGGACTATGAAGTATTAAGGGAAAGGACTGCCACCGGGGAACTTTCTACTCCTGCATATATGCAGAGAAATTCAGGTGTAGATCCTGATGCTGTTGCTGCTATTCGAAGACAACGGCTTAGTGAGATTTCGTTGTGGTTTAATCCACATAATAATAACAATAGTAATAATCATTCCACAACAATCTCACAGGGAGTTACAGAACAACCTTCTAATTTCCCTATTGAAGATGCTCTCCCCACTGAAAACTCTGCCACCAAATGGGCTGTGGAAGGTACTGGGATTCTAGTTGCTACTGGGCTTCTTACTGTTACTCTAGCATGGCTCATTGCTCCTCGTGTTGGAAAGAAGACTGCGAAAAGTGGTCTTCATATTCTTCTTGGAGGTATATGTGCTTTGACAGTTGTAGTCTTCCTTCGCTTTATTGTGCTATCCAGAATCAAGTATGGGCCTGCACGTTACTGGGCAATCTTGTTTGTCTTCTGGTTTCTTGTTTTTGGAATATGGGCTTCCAGAACGCATGGTTCACATTCTACGTGA 1107 0.4309 MGHKEDRLQTSKGGINNEGLCSTIDSENVETYTTPRHSADKDLATCRVCQCAESDRRGDVALGFLDIKPPSQEVPKNNEDQNSNSKEVLKGVESDIVHVKTFGRESGVIEFISPEGEIFICNADLEAGSYHHQDTLISLGCSCKSDLALAHYACALKWFINHGSTVCEICGSVAKNVRPADFKKVVASLKDYEVLRERTATGELSTPAYMQRNSGVDPDAVAAIRRQRLSEISLWFNPHNNNNSNNHSTTISQGVTEQPSNFPIEDALPTENSATKWAVEGTGILVATGLLTVTLAWLIAPRVGKKTAKSGLHILLGGICALTVVVFLRFIVLSRIKYGPARYWAILFVFWFLVFGIWASRTHGSHST* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00452 368 PANTHER ZINC FINGER, RING-CH-TYPE 27 335 - -
Eupl03g00452 368 MobiDBLite consensus disorder prediction 1 20 - -
Eupl03g00452 368 SMART ringv_2 120 171 IPR011016 GO:0008270
Eupl03g00452 368 SUPERFAMILY RING/U-box 134 173 - -
Eupl03g00452 368 ProSiteProfiles Zinc finger RING-CH-type profile. 110 177 IPR011016 GO:0008270
Eupl03g00452 368 Pfam RING-variant domain 136 170 IPR011016 GO:0008270
Eupl03g00452 368 MobiDBLite consensus disorder prediction 68 87 - -
Eupl03g00452 368 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 174 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00452 1 368 C3H Transcription Factor Family AT5G63780 59.517 2.58e-152 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00452 - - tss:122669196 542.347