Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00445 ATGTCCTTGCTCCCAAGTAGTGCAGCATACATGGCGTCGGAGCGAGAGCGTGAAAGCTTCCACAAGTTCTTCGAGTGCTGGATTGTCGAGCAAGACCATCATCTCCAAGACCTCCTCTCTGCTTCATCATCATCAGAAAGGGACTTGCGTCCTTTGATCAACCGAGTCGTTCGGCACTACGAGGATTACTATGGAGCAAAATCCAGATGGGCTAAGCTGAACGTGCTTGCCATGTTGTCTCCCACCTGGACGAGTTCCCTTGAAGACGCATTTCTCTGGATCGGTGGATGGCGACCCAGTATGGCTTTTCATCTCCTCTACTCCAAATCTGGGTTGCAAGTCGAAGCCGGACTCGATGAACTCATTCGTGGACTAGGTACGGGCGATTTGGCTGATCTTTCTCCGACTCAACTCACTCTGGTGGATAATTTACAGAGAGAAACCATTAGAGAAGAGAGGGATATAACGGAGAAGATGGCAAAGCATCAAGAGACTGCTGCCGACTCATCGATGGTTGAGTTATCACACGCTGTGACTGAGATGCTGACAAACGGCGGTGGAGTTGAAGAAGAACGAGTCGAGTCGACTCTGGCGACTAAGGAAGAGGGACTAGAGAAGATTTTGGAAAGAGCTGATAATCTACGGCTCAGGACGCTCAAGGCTGTGATTGCTATTCTCTCGCCGCTTCAGGCCGTCCATTTCTTGATTGCTGCAGCGTCGTTGCACTTGAGGTTTCATGAATGGGGTCAGAAGCGAGACTCGAGTCAGCATGTCAACGTTAGTGAAGGTGTAAAAACGAGGGGTACCCAAATGCTTACTGAGGGCAAAAAATTCCACAACTCTACTAAGTCTGACGTGATCTTGTTGATGAAGTATGTCTTGCTAGTATGA 891 0.4905 MSLLPSSAAYMASERERESFHKFFECWIVEQDHHLQDLLSASSSSERDLRPLINRVVRHYEDYYGAKSRWAKLNVLAMLSPTWTSSLEDAFLWIGGWRPSMAFHLLYSKSGLQVEAGLDELIRGLGTGDLADLSPTQLTLVDNLQRETIREERDITEKMAKHQETAADSSMVELSHAVTEMLTNGGGVEEERVESTLATKEEGLEKILERADNLRLRTLKAVIAILSPLQAVHFLIAAASLHLRFHEWGQKRDSSQHVNVSEGVKTRGTQMLTEGKKFHNSTKSDVILLMKYVLLV* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00445 296 ProSiteProfiles DOG1 domain profile. 17 255 IPR025422 GO:0006351|GO:0043565
Eupl03g00445 296 Pfam Seed dormancy control 35 108 IPR025422 GO:0006351|GO:0043565
Eupl03g00445 296 Coils Coil 197 217 - -
Eupl03g00445 296 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 18 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00445 Eupl-Chr3 19590815 19593424 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00445 27 237 bZIP Transcription Factor Family AT5G06950 27.103 6.40e-17 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00445 - - rvl:131303584 351.288