Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl03g00441 ATGGCCTTAGAGACTCTCCATGAAGACATCCATCAACAGATTCAACACCAACACTTCCATGTTTTAGCAGTAGATGATAGTCTCCTTGACAGAAAGCTCTTAGAGAAGCTTCTTACAGTCTCTTCTTACCATGTTACTTGTGTTGAATCTGGTGATAAAGCTTTGGAGTATCTGGGGTTGCTTGATAACATTGATGGCATTTCAATTTCTTCTTCATCATCACAATCACAGATGCAGGAGGTGAAGGTCAACTTGATCATGACAGACTACTGTATGCCTGGGATGAGTGGCTACGATTTGCTACAACGAGTCAAGAAATCTTCTTGGAAAGACGTCCCCGTCGTGGTCATGTCATCGGAAAACGTGCCTTCCAGAATCAACATGTGCTTGGAAGGAGGAGCAGAGGAGTTCCTGTTGAAGCCGGTTCAGTTATCAGATATGAAGAGGCTTCAACCTCACCTTTTGAAATCCTTAACTTCTAGCTGCAACAACAACAACAACGACAACGACAACAACAACAACAACAACAACAACAACAACAACAGTAACAACAACAGTAACAATAGCAACGACAACAACAACACTAACAACAACAATAACAACAACAATGGAAACAAGAGGAAAGCCATAGCTCCTGAGCCCTCGAAGAGAAGACCCAAGTTTAAAGGCTTAACTGTAGCGTAA 684 0.4211 MALETLHEDIHQQIQHQHFHVLAVDDSLLDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDNIDGISISSSSSQSQMQEVKVNLIMTDYCMPGMSGYDLLQRVKKSSWKDVPVVVMSSENVPSRINMCLEGGAEEFLLKPVQLSDMKRLQPHLLKSLTSSCNNNNNDNDNNNNNNNNNNNSNNNSNNSNDNNNTNNNNNNNNGNKRKAIAPEPSKRRPKFKGLTVA* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl03g00441 227 Gene3D - 20 177 - -
Eupl03g00441 227 MobiDBLite consensus disorder prediction 158 227 - -
Eupl03g00441 227 CDD REC_typeA_ARR 21 150 - -
Eupl03g00441 227 SMART REC_2 19 151 IPR001789 GO:0000160
Eupl03g00441 227 SUPERFAMILY CheY-like 18 156 IPR011006 -
Eupl03g00441 227 ProSiteProfiles Response regulatory domain profile. 20 155 IPR001789 GO:0000160
Eupl03g00441 227 MobiDBLite consensus disorder prediction 158 208 - -
Eupl03g00441 227 PANTHER TWO-COMPONENT RESPONSE REGULATOR 19 198 IPR045279 GO:0009736
Eupl03g00441 227 Pfam Response regulator receiver domain 21 148 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl03g00441 Eupl-Chr3 19491291 19495041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl03g00441 18 157 Response Regulator Gene Family AT3G57040 61.268 3.56e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl03g00441 Response_reg 5e-18 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl03g00441 K14492 - nnu:104605781 254.988